Retracted: Nuclear localization and in situ DNA damage by Mycobacterium tuberculosis nucleoside-diphosphate kinase

Adesh Kumar Saini1, Kapil Maithal, Prem Chand

  • 1Dr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi 110 007, India.

Insights

Mycobacterium tuberculosis nucleoside-diphosphate kinase (mNdK) is secreted and enters host cell nuclei. This enzyme damages DNA, potentially causing cell death to aid pathogen spread.

Area of Science:

  • Microbiology
  • Molecular Biology
  • Biochemistry

Background:

  • Nucleoside-diphosphate kinase (NdK) is crucial for maintaining cellular nucleoside triphosphate pools.
  • The secretion of Mycobacterium tuberculosis NdK (mNdK) suggests a role beyond intracellular metabolism.
  • The biological significance of mNdK secretion remains unclear.

Purpose of the Study:

  • To investigate the biological role and function of the secreted Mycobacterium tuberculosis nucleoside-diphosphate kinase (mNdK).
  • To determine the cellular localization and enzymatic activity of mNdK in host cells.

Main Methods:

  • Expression of mNdK fused to green fluorescent protein in HeLa and COS-1 cells.
  • Detection of mNdK localization using microscopy.
  • Assay of mNdK activity on isolated nuclei and plasmid DNA using surface plasmon resonance and electron paramagnetic resonance.
  • Investigation of metal ion and oxygen dependency for DNA cleavage.

Main Results:

  • mNdK was detected within the nuclei of transfected HeLa and COS-1 cells.
  • mNdK induced in situ damage to chromosomal DNA.
  • mNdK binds supercoiled plasmid DNA and cleaves it in a metal ion-dependent manner.
  • DNA cleavage is mediated by superoxide radicals and requires molecular oxygen.

Conclusions:

  • Secreted mNdK localizes to host cell nuclei and possesses DNA damaging capabilities.
  • The DNA-damaging activity of mNdK, potentially involving superoxide radicals, suggests a mechanism for host cell manipulation.
  • mNdK may contribute to Mycobacterium tuberculosis pathogenesis by inducing host cell death, facilitating pathogen dissemination.

Related Concept Videos

Nucleotide Excision Repair01:08

Nucleotide Excision Repair

Overview
Translesion DNA Polymerases02:10

Translesion DNA Polymerases

Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
DNA Damage can Stall the Cell Cycle02:36

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart, a...
Nucleotide Excision Repair01:38

Nucleotide Excision Repair

DNA Distortion and Damage
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
DNA Damage Can Stall the Cell Cycle02:36

DNA Damage Can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...