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Suppression of clonogenicity by mammalian Dnmt1 mediated by the PCNA-binding domain
Simeon Santourlidis1, Fumihiro Kimura, Johannes Fischer
1Urologische Klinik Heinrich Heine Universität, Moorenstrasse 5, 40225 Düsseldorf, Germany. santourlidis@itz.uni-duesseldorf.de
Abstract:
Overexpression of the major DNA methyltransferase Dnmt1 is cytotoxic and has been hypothesized to result in aberrant hypermethylation of genes required for cell survival. Indeed, overexpression of mouse or human Dnmt1 in murine and human cell lines decreased clonogenicity. By frame-shift and deletion constructs, this effect of mouse Dnmt1 was localized at the N-terminal 124 amino acid domain, which mediates interaction with proliferating cell nuclear antigen (PCNA). Mutation of the PCNA-binding site restored normal cloning efficiencies. Overexpression of Dnmt3A or Dnmt3B, which do not interact with PCNA, yielded weaker effects on clonogenicity. Following introduction of the toxic domain, no significant effects on apoptosis, replication, or overall DNA methylation were observed for up to 3 d. Suppression of clonogenicity by Dnmt1 was also observed in cell lines lacking wild-type p53, p21(CIP1), or p16(INK4A). Suppression of clonogenicity by Dnmt1 overexpression may act as a fail-safe mechanism against carcinogenicity of sustained Dnmt1 overexpression.
Insights
Overexpression of DNA methyltransferase 1 (Dnmt1) reduces cell survival by impairing clonogenicity. This effect is linked to its N-terminal domain interacting with proliferating cell nuclear antigen (PCNA), suggesting a protective mechanism against cancer.
Area of Science:
- Epigenetics and DNA Methylation
- Cell Biology
- Cancer Biology
Background:
- Aberrant DNA methylation is implicated in cancer development.
- DNA methyltransferase 1 (Dnmt1) overexpression is hypothesized to cause cytotoxicity through gene hypermethylation.
- The precise mechanisms and cellular consequences of Dnmt1 overexpression require further elucidation.
Purpose of the Study:
- To investigate the cytotoxic effects of DNA methyltransferase 1 (Dnmt1) overexpression.
- To identify the specific domains and interactions responsible for Dnmt1-mediated cytotoxicity.
- To explore the potential role of Dnmt1 overexpression in cellular defense against carcinogenicity.
Main Methods:
- Overexpression of mouse and human Dnmt1 in murine and human cell lines.
- Utilized frame-shift and deletion constructs to map the functional domain of Dnmt1.
- Investigated the role of proliferating cell nuclear antigen (PCNA) interaction via mutation of the binding site.
- Assessed effects on clonogenicity, apoptosis, replication, and global DNA methylation.
- Examined Dnmt1 overexpression effects in cell lines with altered p53, p21(CIP1), or p16(INK4A) status.
Main Results:
- Dnmt1 overexpression significantly decreased cell clonogenicity in various cell lines.
- The cytotoxic effect was localized to the N-terminal 124 amino acid domain of Dnmt1, mediating PCNA interaction.
- Mutation of the PCNA-binding site abolished the suppressive effect on clonogenicity.
- Overexpression of Dnmt3A and Dnmt3B, which do not bind PCNA, had weaker effects.
- No significant impact on apoptosis, replication, or overall DNA methylation was observed within 3 days.
- Dnmt1-mediated suppression of clonogenicity occurred independently of wild-type p53, p21(CIP1), or p16(INK4A).
Conclusions:
- Dnmt1 overexpression induces cytotoxicity by suppressing cell clonogenicity, primarily through its PCNA-interacting N-terminal domain.
- This mechanism appears to function independently of major cell cycle regulators like p53.
- Dnmt1's ability to suppress clonogenicity may serve as a safeguard against the oncogenic potential of its sustained overexpression.
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