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Identification of MyoD Interactome Using Tandem Affinity Purification Coupled to Mass Spectrometry
Published on: May 17, 2016
Nuclear hormone receptor coregulator GRIP1 suppresses, whereas SRC1A and p/CIP coactivate, by domain-specific binding
Hung-Yi Wu1, Yasuo Hamamori, Jianming Xu
1Institute for Genetic Medicine and Department of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California, Los Angeles, California 90033, USA.
Abstract:
p160 coregulators were initially identified as nuclear hormone receptor coactivators. In this study, functional data demonstrate that members of the three p160 families can have opposing roles in regulating gene expression by the same transcription factor. Both SRC1A and p/CIP function as coactivators for MyoD-mediated transcription whereas GRIP1 acts negatively as a (co)repressor. SRC1A and p/CIP predominantly interact with distinct sites on the NH2-terminal activation domain of MyoD. GRIP1 binds to both these regions but it alone, and neither SRC1A nor p/CIP, also interacts with specific sites on MyoD that are critical for the binding of the essential MyoD coactivator, p300. This suggests that competition by GRIP1 for SRC1A, p/CIP, and p300 binding sites on a transcription factor may regulate the activity of the factor.
Insights
p160 proteins, like SRC1A and p/CIP, can activate gene expression, while GRIP1 represses it. This study reveals how these coactivators interact with transcription factors like MyoD, influencing gene regulation.
Area of Science:
- Molecular Biology
- Gene Regulation
- Protein-Protein Interactions
Background:
- p160 proteins were initially identified as nuclear hormone receptor coactivators.
- Understanding the diverse roles of p160 family members in gene regulation is crucial.
Purpose of the Study:
- To investigate the functional roles of p160 family members in transcription regulation.
- To elucidate the mechanisms by which p160 proteins interact with transcription factors.
Main Methods:
- Functional assays to assess gene expression.
- Analysis of protein-protein interactions between p160 proteins and transcription factors.
Main Results:
- p160 family members exhibit opposing roles in regulating gene expression by the same transcription factor.
- SRC1A and p/CIP act as coactivators for MyoD, while GRIP1 functions as a repressor.
- GRIP1 competes with other coactivators (SRC1A, p/CIP, p300) for binding sites on MyoD, suggesting a regulatory mechanism.
Conclusions:
- p160 coactivators can have opposing functions, acting as either coactivators or corepressors.
- Differential binding of p160 proteins to transcription factor activation domains regulates gene expression.
- Competition for binding sites on transcription factors is a key mechanism controlling their activity.
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