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In Vivo Inhibition of MicroRNA to Decrease Tumor Growth in Mice
Published on: August 23, 2019
Gene expression profiles reveal that DCN, DIO1, and DIO2 are underexpressed in benign and malignant thyroid tumors
L A T Arnaldi1, R C Borra, R M B Maciel
1Laboratory of Molecular Endocrinology, Division of Endocrinology, Department of Medicine, Federal University of São Paulo, Rua Pedro de Toledo 781-12 andar 04039-032, São Paulo, Brazil.
Abstract:
To investigate the molecular events involved in the pathogenesis and/or progression of thyroid tumors, we compared the gene expression profiles of three thyroid carcinoma cell lines, which represent major tumor subtypes of thyroid cancer and normal thyroid tissue. Using cDNA array methodology, we investigated the expression of 1807 open reading frame expressed sequence tags (ORESTES), selected from head and neck tumor libraries generated through the Brazilian Human Cancer Project-LICR/FAPESP. We found that 505 transcripts were differentially expressed in the thyroid carcinoma cell lines. Using a more stringent criterion, transcripts underexpressed or overexpressed more than fivefold in 1 of 3 or 3 of 3 carcinoma cell lines, a list of 55 ESTs were detected. Five candidate genes were further validated by quantitative polymerase chain reaction (qPCR) in an independent set of 52 thyroid tumors and 22 matched normal thyroid tissues. DCN was found underexpressed in a high percentage of the follicular thyroid adenomas, follicular thyroid carcinomas, and follicular variant of papillary thyroid carcinomas. DIO1 and DIO2 were underexpressed in nearly all papillary thyroid carcinomas. These genes not only could help to better define a tumor signature for thyroid tumors, but may, in part, also become useful as potential targets for thyroid tumor treatment.
Insights
Researchers identified key gene expression changes in thyroid tumors. Specific genes like DCN, DIO1, and DIO2 were underexpressed, offering potential diagnostic markers and therapeutic targets for thyroid cancer.
Area of Science:
- Oncology
- Molecular Biology
- Genomics
Background:
- Thyroid tumors exhibit complex molecular alterations.
- Understanding gene expression profiles is crucial for pathogenesis and progression insights.
Purpose of the Study:
- To identify differentially expressed genes in thyroid carcinoma cell lines compared to normal thyroid tissue.
- To validate candidate genes as potential biomarkers and therapeutic targets for thyroid tumors.
Main Methods:
- Utilized cDNA array methodology to analyze 1807 expressed sequence tags (ESTs).
- Applied stringent criteria to identify significantly underexpressed or overexpressed transcripts.
- Validated candidate genes using quantitative polymerase chain reaction (qPCR) on independent thyroid tumor and normal tissue samples.
Main Results:
- Identified 505 differentially expressed transcripts in thyroid carcinoma cell lines.
- Detected 55 ESTs with significant ( >5-fold) differential expression.
- Found DCN underexpression in follicular adenomas and carcinomas, and DIO1/DIO2 underexpression in papillary thyroid carcinomas.
Conclusions:
- Specific gene expression patterns, including DCN, DIO1, and DIO2 underexpression, characterize thyroid tumors.
- These genes may serve as diagnostic signatures for thyroid tumors.
- Identified genes represent potential therapeutic targets for thyroid tumor treatment.
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