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Updated: Jul 18, 2026

Monitoring Protein-RNA Interaction Dynamics In Vivo at High Temporal Resolution Using χCRAC
Published on: May 9, 2020
ZBP1 regulates mRNA stability during cellular stress
Nadine Stöhr1, Marcell Lederer, Claudia Reinke
1NBL3 Research Group, Zentrum für Angewandte Medizinische und Humanbiologische Forschung, Department of Medicine, Martin-Luther-University, 06120 Halle, Germany.
Abstract:
An essential constituent of the integrated stress response (ISR) is a reversible translational suppression. This mRNA silencing occurs in distinct cytoplasmic foci called stress granules (SGs), which transiently associate with processing bodies (PBs), typically serving as mRNA decay centers. How mRNAs are protected from degradation in these structures remains elusive. We identify that Zipcode-binding protein 1 (ZBP1) regulates the cytoplasmic fate of specific mRNAs in nonstressed cells and is a key regulator of mRNA turnover during the ISR. ZBP1 association with target mRNAs in SGs was not essential for mRNA targeting to SGs. However, ZBP1 knockdown induced a selective destabilization of target mRNAs during the ISR, whereas forced expression increased mRNA stability. Our results indicate that although targeting of mRNAs to SGs is nonspecific, the stabilization of mRNAs during cellular stress requires specific protein-mRNA interactions. These retain mRNAs in SGs and prevent premature decay in PBs. Hence, mRNA-binding proteins are essential for translational adaptation during cellular stress by modulating mRNA turnover.
Insights
Zipcode-binding protein 1 (ZBP1) prevents mRNA degradation during cellular stress. This protein stabilizes specific mRNAs within stress granules, ensuring proper translational adaptation and preventing premature decay.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- The integrated stress response (ISR) involves reversible translational suppression.
- mRNA silencing occurs in cytoplasmic stress granules (SGs), which associate with processing bodies (PBs).
- Mechanisms protecting mRNAs from degradation within SGs are not fully understood.
Purpose of the Study:
- To investigate the role of Zipcode-binding protein 1 (ZBP1) in mRNA regulation during cellular stress.
- To determine how ZBP1 influences mRNA turnover and stability within stress granules.
Main Methods:
- Investigated ZBP1's function in mRNA fate regulation in unstressed and stressed cells.
- Assessed the impact of ZBP1 knockdown and overexpression on target mRNA stability during ISR.
- Analyzed ZBP1's association with mRNAs in stress granules.
Main Results:
- ZBP1 regulates the cytoplasmic fate of specific mRNAs.
- ZBP1 association with mRNAs in SGs is not required for SG targeting.
- ZBP1 knockdown selectively destabilizes target mRNAs during ISR; overexpression enhances stability.
Conclusions:
- mRNA stabilization during cellular stress requires specific protein-mRNA interactions, not just SG targeting.
- ZBP1 retains mRNAs in SGs, preventing premature decay in PBs.
- mRNA-binding proteins like ZBP1 are crucial for translational adaptation during stress by modulating mRNA turnover.
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