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Updated: Jul 18, 2026

An Intestinal Gut Organ Culture System for Analyzing Host-Microbiota Interactions
Published on: June 30, 2021
[Microecological aspects of small intestinal bacterial overgrowth syndrome]
Abstract:
Small intestinal bacterial overgrowth syndrome (SIBOS) means chronic recurrent diarrhea with malabsorption, intoxication and increased risk of endogenous infection. This syndrome are accompanied by increase of overall bacterial burden in biotope >10(5) CFU/ml in adults and >10(4) CFU/ml in children, emergence of different species of enterobacteria, bacteroides, clostridia and fusobacteria et al. in small intestine. Such characteristics of the syndrome allow to consider it as syndrome of disturbances of intestinal microflora (dysbacteriosis). Microecological changes are accompanied by B12 vitamin deficiency anemia, hypovitaminosis, protein deficiency, translocation of bacteria and their toxins from intestine in blood, emergence of endotoxinemia and possible generalization of infection. SIBOS is diagnosed by concentration of hydrogen in expiratory flow (lactulosa load test) or by bacteriological study of aspirate from proximal part of small intestine. Complex treatment includes containing lacto- and bifidobacteria probiotics and, in more severe cases, antimicrobial agents (vancomycine, metronidazole, aminoglycosides, amoxicillin clavulanate, tetracycline, and cephalosporines of 2nd generation) with following correction of disturbed microbiocenosis by different probiotics.
Insights
Small intestinal bacterial overgrowth syndrome (SIBOS) involves excessive bacteria in the small intestine, leading to malabsorption and infection risks. Diagnosis uses breath tests or aspirate cultures, with treatment involving probiotics and antibiotics.
Area of Science:
- Gastroenterology
- Microbiology
- Internal Medicine
Context:
- Small intestinal bacterial overgrowth syndrome (SIBOS) is characterized by chronic diarrhea, malabsorption, and increased infection risk.
- Elevated bacterial counts (>10^5 CFU/ml in adults, >10^4 CFU/ml in children) and diverse microbial species in the small intestine define SIBOS.
- SIBOS represents a significant disturbance of intestinal microflora, often termed dysbacteriosis.
Purpose:
- To define Small Intestinal Bacterial Overgrowth Syndrome (SIBOS) and its associated clinical and microbiological features.
- To outline diagnostic methods for SIBOS, including hydrogen breath testing and direct small intestine aspirate analysis.
- To describe the comprehensive treatment strategies for SIBOS, encompassing probiotics and antimicrobial agents.
Summary:
- SIBOS presents with malabsorption, intoxication, and heightened risk of endogenous infection due to increased bacterial load in the small intestine.
- Microecological shifts in SIBOS can lead to B12 deficiency anemia, hypovitaminosis, protein deficiency, bacterial translocation, endotoxinemia, and potential infection generalization.
- Diagnostic approaches include lactulose breath tests measuring hydrogen concentration and bacteriological examination of small intestinal aspirates.
- Treatment involves probiotics (Lactobacillus, Bifidobacterium) and, for severe cases, antibiotics such as vancomycin, metronidazole, aminoglycosides, amoxicillin-clavulanate, tetracycline, and second-generation cephalosporins, followed by probiotic restoration.
Impact:
- Understanding SIBOS is crucial for managing chronic gastrointestinal disorders characterized by malabsorption and dysbiosis.
- Accurate diagnosis and targeted treatment of SIBOS can prevent complications like vitamin deficiencies and systemic infections.
- Effective management of SIBOS, combining antibiotics and probiotics, aims to restore intestinal homeostasis and improve patient outcomes.
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