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Related Concept Videos

Protein Denaturation01:28

Protein Denaturation

The function of proteins depends on their native three-dimensional structure, which is dictated by the amino acid sequence of the specific protein. Folding of the polypeptide chain takes place under specific conditions that energetically favor the folded conformation. In contrast, protein denaturation occurs spontaneously under unfavorable conditions that disrupt the integrity of the folded conformation. Thus, the chemical and physical environment of a protein, such as significant changes in pH...
Nucleosome Remodeling02:54

Nucleosome Remodeling

Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Diversity of Archaea IV01:29

Diversity of Archaea IV

Hyperthermophilic archaea are a group of extremophiles thriving at temperatures above 80°C, often in hydrothermal vents and volcanic soils where conditions surpass the boiling point of water. At such temperatures, proteins, membranes, and DNA in most organisms degrade, but hyperthermophiles have evolved remarkable adaptations to maintain stability and function.Unique Cellular FeaturesHyperthermophilic membranes are composed of a monolayer of biphytanyl tetraether lipids, which resist thermal...
Spreading of Chromatin Modifications02:25

Spreading of Chromatin Modifications

The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer is an enzyme that can...
Diversity of Archaea III01:27

Diversity of Archaea III

Crenarchaeota, a prominent phylum of Archaea, is remarkable for its ability to thrive in extreme environments characterized by high temperatures and acidity. These microorganisms inhabit sulfuric hot springs, volcanic systems, and submarine hydrothermal vents, where temperatures often exceed 100°C. The unique adaptations of Crenarchaeota not only allow survival under such extreme conditions but also provide insights into the mechanisms of life in primordial Earth-like environments.Morphological...
Histone Modification02:32

Histone Modification

The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...

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Unveiling Histone Proteoforms using 2D-TAU Gel Electrophoresis
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Published on: October 18, 2024

Thermal fluctuations in histone during denaturation.

K S Nagapriya1, A K Raychaudhuri, G V Shivashankar

  • 1Department of Physics, Indian Institute of Science, Bangalore 560012, India.

Journal of Nanoscience and Nanotechnology
|July 28, 2007
PubMed
Summary

Thermal denaturation of linker histone H1, a key chromatin component, involves complex energy changes. This study reveals cooling and heating jumps during denaturation, indicating a non-simple thermal unfolding process.

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Area of Science:

  • Biophysics
  • Molecular Biology
  • Chromatin Structure

Background:

  • Linker histone H1 is essential for chromatin assembly and higher-order structure.
  • Understanding histone H1 thermal denaturation is crucial for comprehending DNA organization and stability.
  • Thermal fluctuations play a significant role in biomolecular processes.

Purpose of the Study:

  • To investigate the thermal fluctuations during the denaturation of linker histone H1.
  • To characterize the complex thermal unfolding process of histone H1.
  • To utilize a high-sensitivity nanocalorimeter for precise fluctuation measurements.

Main Methods:

  • Utilized a sensitive nanocalorimeter-based thermal fluctuation measurement setup.
  • Measured thermal fluctuations with an accuracy of 1 part per billion.
  • Analyzed the thermal denaturation process of linker histone H1.

Main Results:

  • The thermal denaturation of linker histone H1 is a complex, multi-stage process.
  • Observed distinct cooling jumps, indicative of energy absorption.
  • Identified subsequent slow dynamics followed by heating jumps, representing energy release.

Conclusions:

  • Histone H1 denaturation is not a simple, single-step unfolding event.
  • The observed cooling and heating jumps suggest intermediate states or cooperative unfolding mechanisms.
  • These findings provide new insights into the thermal stability and dynamics of chromatin components.