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Updated: Jul 10, 2026

Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay (EMSA) and DNA-affinity Precipitation Assay (DAPA)
Published on: August 21, 2016
Point mutation assay by affinity capillary electrophoresis using poly(ethylene glycol)-oligodeoxyribonucleotide block
Ayumi Kimura1, Tohru Takarada, Naoki Kanayama
1RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.
Abstract:
An affinity capillary electrophoresis was developed for detecting a point mutation of single-stranded DNA (ssDNA). Poly(ethylene glycol)-oligodeoxyribonucleo-tide block copolymers (PEG-b-ODN) were prepared to use as a novel affinity ligand. Optimization of the analytical conditions, such as the salt concentration of running buffer, the capillary temperature and the base number of the copolymer, gave two distinct peaks for wild-type (WT) and point-mutated ssDNA (MT) on the electropherogram, allowing for the facile discrimination of the single-base difference.

