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Updated: Jul 11, 2026

From Voxels to Knowledge: A Practical Guide to the Segmentation of Complex Electron Microscopy 3D-Data
Published on: August 13, 2014
Multiscale image segmentation using wavelet-domain hidden Markov models
1Dept. of Electr. and Comput. Eng., Rice Univ., Houston, TX 77005-1892, USA. choi@ece.rice.edu
Abstract:
We introduce a new image texture segmentation algorithm, HMTseg, based on wavelets and the hidden Markov tree (HMT) model. The HMT is a tree-structured probabilistic graph that captures the statistical properties of the coefficients of the wavelet transform. Since the HMT is particularly well suited to images containing singularities (edges and ridges), it provides a good classifier for distinguishing between textures. Utilizing the inherent tree structure of the wavelet HMT and its fast training and likelihood computation algorithms, we perform texture classification at a range of different scales. We then fuse these multiscale classifications using a Bayesian probabilistic graph to obtain reliable final segmentations. Since HMTseg works on the wavelet transform of the image, it can directly segment wavelet-compressed images without the need for decompression into the space domain. We demonstrate the performance of HMTseg with synthetic, aerial photo, and document image segmentations.

