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Updated: Jul 4, 2026

Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification
Published on: November 15, 2017
Label-free mass spectrometry-based protein quantification technologies in proteomic analysis
Mu Wang1, Jinsam You, Kerry G Bemis
1Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, 1345 W, 16th Street, Room 312, Indianapolis, IN 46202, USA. muwang@indiana.edu
Proteomics advancements enable efficient biomarker discovery. This review highlights label-free mass spectrometry methods to reduce costs and increase throughput for protein biomarker identification.
Area of Science:
- Proteomics and biomarker discovery
Background:
- Recent technological advances have accelerated proteomics for biomarker discovery and validation.
- Current proteomic methods for biomarker discovery are often labor-intensive and expensive, lacking automation.
- There is a need for automated, high-throughput, and cost-effective proteomic strategies.
Purpose of the Study:
- To review label-free mass spectrometry-based protein quantification technologies.
- To discuss the application of these technologies in biomarker discovery.
- To present a case study demonstrating a label-free mass spectrometry method for biomarker discovery.
Main Methods:
- Focus on label-free mass spectrometry for protein quantification.
- Discussion of technological advancements in proteomics.
- Case study illustrating a specific label-free method.
Main Results:
- Label-free mass spectrometry offers efficient protein quantification.
- Automation and advanced software are crucial for high-throughput biomarker discovery.
- The discussed methods can reduce the cost of biomarker discovery.
Conclusions:
- Label-free mass spectrometry is a promising technology for protein biomarker discovery.
- Improved automation and data handling are essential for advancing proteomics.
- Technological progress is driving more efficient and cost-effective biomarker identification.
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