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Human Pluripotent Stem Cell Based Developmental Toxicity Assays for Chemical Safety Screening and Systems Biology Data Generation
Published on: June 17, 2015
Acutoxbase, an innovative database for in vitro acute toxicity studies
Agnieszka Kinsner-Ovaskainen1, Radosław Rzepka, Robert Rudowski
1European Centre for the Validation of Alternative Methods (ECVAM), Institute for Health and Consumer Protection (IHCP), European Commission Joint Research Centre, Ispra, VA, Italy. agnieszka.kinsner@jrc.it
Acutoxbase is a new database for managing in vitro and in vivo toxicity data. It supports the A-Cute-Tox project, aiming to optimize in vitro testing strategies for predicting human toxicity.
Area of Science:
- Toxicology
- Bioinformatics
- In vitro testing
Background:
- The A-Cute-Tox project aimed to optimize and prevalidate in vitro testing strategies for predicting acute human toxicity.
- Effective data management is crucial for integrating diverse toxicological datasets.
Purpose of the Study:
- To develop Acutoxbase, an internet-based database for managing toxicological information.
- To facilitate the collection, organization, and quality-controlled transfer of in vitro and in vivo data.
Main Methods:
- Designed two principal database components: one for in vitro data and one for in vivo data.
- The in vitro section adheres to Good Cell Culture Practice (GCCP) and Standard Operating Procedures (SOPs).
- Compiled data from approximately 100 in vitro assays on 97 reference chemicals and included published in vivo studies and clinical poisoning cases.
Main Results:
- Acutoxbase successfully archives and organizes large sets of in vitro and in vivo toxicological data.
- The database provides a standardized format for collecting in vitro data, including detailed methodologies.
- It integrates data from various toxicity models, covering cytotoxicity, metabolism, biokinetics, and organ-specific toxicities.
Conclusions:
- Acutoxbase serves as a valuable tool for managing and transferring complex toxicological data.
- The database is under continuous development and will soon be accessible to toxicologists and physicians.
- It supports the advancement of in vitro testing strategies for predicting human toxicity.
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