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Updated: Jun 23, 2026

Amplification of Near Full-length HIV-1 Proviruses for Next-Generation Sequencing
Published on: October 16, 2018
Viral reservoirs and HIV-specific immunity
1Division of Infectious Diseases, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205, USA. jblanks@jhmi.edu
Human immunodeficiency virus type 1 (HIV-1) evades immune detection during initial infection, establishing latent reservoirs that prevent eradication. Current therapies and vaccines face challenges due to these persistent viral sanctuaries.
Area of Science:
- Immunology
- Virology
- Infectious Diseases
Background:
- Human immunodeficiency virus type 1 (HIV-1) infection establishes latent reservoirs, including infected CD4 T cells and anatomical sanctuaries.
- These reservoirs pose significant barriers to eradication by antiretroviral therapy and hinder the development of effective preventive vaccines.
Purpose of the Study:
- To review mechanisms of HIV-1 immune evasion and latent infection establishment.
- To explore reasons for the lack of eradication of latently infected cells by the immune system.
- To discuss HIV-specific immune responses within anatomical sanctuaries.
Main Methods:
- This is a review article, synthesizing existing research on HIV-1 immune evasion and reservoir formation.
- Analysis of studies investigating HIV-specific immune responses in various anatomical sites.
Main Results:
- HIV-1 effectively evades the immune system during primary infection.
- Anatomical sanctuaries, such as gut-associated lymphatic tissue, are established early and serve as major sites for viral replication.
- HIV-specific CD8 T-cell responses develop late and are insufficient to clear the established infection.
Conclusions:
- HIV-1 establishes persistent latent reservoirs during primary infection through immune evasion.
- Anatomical sanctuaries are critical sites for viral replication and immune evasion.
- The immune system, including HIV-specific CD8 T-cell responses, cannot effectively clear HIV-1 infection due to early reservoir establishment.
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