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Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
Smaqnr, a new chromosome-encoded quinolone resistance determinant in Serratia marcescens
C Velasco1, J M Rodríguez-Martínez, A Briales
1Department of Microbiology, University of Seville, Seville, Spain. cvelasco@us.es
Objectives:
A new pentapeptide repeat (PRP) protein, named SmaQnr, from the clinically relevant species Serratia marcescens, which decreased susceptibility to quinolones when expressed in Escherichia coli, is reported herein.
Methods:
In silico analysis revealed the presence of a gene encoding a Qnr-like protein that shares 80% amino acid identity with QnrB1 in the S. marcescens strain Db11. Fragments carrying the coding region and the upstream non-coding sequences of eight clinical isolates were cloned and expressed in E. coli. MIC values of quinolones were determined. RT-PCR was used to study expression of these genes in their natural host. Southern hybridization was used to explore the presence of the gene in the genus Serratia.
Results:
Recombinant plasmids encoding SmaQnr reduced susceptibility to fluoroquinolones and nalidixic acid in both E. coli ATCC 25922 and DH10B. Sequences upstream of these genes contain a LexA box. Conventional RT-PCR showed transcription of the analysed Smaqnr genes in their natural hosts. Southern blot analysis suggests the presence of similar genes in several species of the genus Serratia.
Conclusions:
SmaQnr conferred a reduced susceptibility phenotype against fluoroquinolones in E. coli. These data provide evidence of its possible role in quinolone resistance in S. marcescens. This Gram-negative species may constitute a reservoir for qnr-like quinolone resistance genes.
Insights
A novel quinolone resistance gene, SmaQnr, identified in Serratia marcescens, confers reduced susceptibility to fluoroquinolones when expressed in Escherichia coli. This finding suggests S. marcescens may be a reservoir for quinolone resistance genes.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Quinolone antibiotics are crucial for treating bacterial infections.
- Emerging resistance mechanisms threaten their efficacy.
- Qnr-like proteins are known to confer reduced susceptibility to quinolones.
Purpose of the Study:
- To identify and characterize a novel quinolone resistance determinant in Serratia marcescens.
- To investigate the role of the identified protein, SmaQnr, in quinolone resistance.
- To explore the prevalence of similar genes within the Serratia genus.
Main Methods:
- In silico analysis to identify Qnr-like genes.
- Gene cloning and expression in Escherichia coli.
- Determination of Minimum Inhibitory Concentration (MIC) values for various quinolones.
- Reverse transcription-PCR (RT-PCR) for gene expression analysis.
- Southern hybridization for gene prevalence studies.
Main Results:
- A novel Qnr-like protein, SmaQnr, was identified in Serratia marcescens.
- Expression of SmaQnr in E. coli reduced susceptibility to fluoroquinolones and nalidixic acid.
- The SmaQnr gene is transcribed in its natural host, S. marcescens.
- Southern blot analysis indicated the presence of similar genes in other Serratia species.
Conclusions:
- SmaQnr confers reduced susceptibility to fluoroquinolones in E. coli.
- S. marcescens may play a role in the dissemination of quinolone resistance.
- The genus Serratia could be a reservoir for qnr-like quinolone resistance genes.
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