Related Experiment Video
Updated: Jun 18, 2026

10:59
Visualizing and Quantifying Endonuclease-Based Site-Specific DNA Damage
Published on: August 21, 2021
The ubiquitin landscape at DNA double-strand breaks
Troy E Messick1, Roger A Greenberg
1Department of Cancer Biology, Abramson Family Cancer Research Institute, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
The Journal of Cell Biology
|December 2, 2009
Summary
DNA double-strand break (DSB) repair is linked to cancer. This review explores how ubiquitin chains at DSB sites, with varied structures, signal distinct functions for DNA repair and checkpoint control.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- DNA double-strand breaks (DSBs) are critical DNA lesions impacting genome integrity and cancer susceptibility.
- The cellular DNA damage response (DDR) machinery plays a key role in managing DSBs.
- Ubiquitin signaling is increasingly recognized as a crucial component of the DDR at DSB sites.
Purpose of the Study:
- To review recent advances in understanding non-degradative ubiquitin signaling at DSBs.
- To propose a model where non-uniform ubiquitin structures mediate distinct functions in DSB repair and checkpoint signaling.
- To discuss the implications of recognizing different ubiquitin structures for DNA damage responses.
Main Methods:
- Literature review of recent research on ubiquitin signaling in DNA repair.
- Analysis of evidence implicating ubiquitin chain synthesis, recognition, and hydrolysis at DSB sites.
- Synthesis of findings to propose a model for non-uniform ubiquitin structures.
Main Results:
- Ubiquitin chain dynamics are central to the cellular response to DSBs.
- Non-uniform ubiquitin structures, utilizing different linkages, are proposed to serve distinct functional outputs.
- Recognition of specific ubiquitin structures influences downstream DNA damage responses.
Conclusions:
- Non-degradative ubiquitin signaling is a complex and critical aspect of DSB repair.
- The diversity of ubiquitin linkages at DSBs allows for precise regulation of repair and signaling pathways.
- Further research into ubiquitin structure recognition is essential for understanding genome integrity maintenance and cancer development.
Related Concept Videos
Fixing Double-strand Breaks
The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
Fixing Double-strand Breaks
The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
Homologous Recombination
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
Nucleotide Excision Repair
Overview
Nucleotide Excision Repair
DNA Distortion and Damage
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Nucleotide Excision Repair
Overview

