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Updated: Jun 13, 2026

Sample Preparation and Analysis of RNASeq-based Gene Expression Data from Zebrafish
Published on: October 27, 2017
Oligonucleotide-based tools for studying zebrafish development
Ilya A Shestopalov1, James K Chen
1Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, California 94305, USA.
Abstract:
Synthetic and nonnatural oligonucleotides have been used extensively to interrogate gene function in zebrafish. In this review, we survey the capabilities and limitations of various oligonucleotide-based technologies for perturbing RNA function and tracking RNA expression. We also examine recent strategies for achieving spatiotemporal control of oligonucleotide function, particularly light-gated technologies that exploit the optical transparency of zebrafish embryos.

