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A Fast and Reliable Pipeline for Bacterial Transcriptome Analysis Case study: Serine-dependent Gene Regulation in Streptococcus pneumoniae
Published on: April 25, 2015
Characterization and transfer studies of macrolide resistance genes in Streptococcus pneumoniae from Denmark
Karen L Nielsen1, Anette M Hammerum, Lotte M Lambertsen
1National Centre for Antimicrobials and Infection Control, Statens Serum Institut, Copenhagen, Denmark. KTE@ssi.dk
Abstract:
Over the last decade, erythromycin resistance has been increasing in frequency in Streptococcus pneumoniae in Denmark. In the present study, 49 non-related erythromycin-resistant S. pneumoniae isolates from invasive sites and 20 isolates from non-invasive sites were collected; antimicrobial susceptibility was tested, and they were genotyped and serotyped. Gene transfer was studied for selected isolates. The frequency of erm(B) was significantly higher in non-invasive isolates compared to invasive isolates (p = 0.001). For the first time, mef(I) was detected in 1 isolate in Denmark. All tested mef(E) isolates had an identical mef(E) sequence, apart from 1 gene with a point mutation, and mef(E) was correlated to 7 different sero-types. The tested erm(B) sequences were 99.3% similar with 5 point mutations at different positions distributed among different serotypes, which did not cause a detectable influence on the protein. Transformation was detectable in 5 out of 13 isolates and transfer of erm(B), mef(I) and mef(E) was detected. To our knowledge, this is the first time mef(I) has been proved transformable. Gene transfer by conjugation was not detectable. Erythromycin resistance in pneumococcal isolates is likely to be caused primarily by horizontal spread of mef(E) and erm(B), as well as clonal spread of a serotype 14 strain carrying mef(A) primarily detected in invasive isolates.
Insights
Erythromycin resistance in Streptococcus pneumoniae is rising in Denmark. The study found erm(B) resistance genes more common in non-invasive strains, with horizontal gene spread of erm(B) and mef(E) being key drivers.
Area of Science:
- Microbiology
- Molecular Biology
- Epidemiology
Background:
- Erythromycin resistance in Streptococcus pneumoniae has increased in Denmark over the past decade.
- Understanding the genetic basis and spread of resistance is crucial for public health.
Purpose of the Study:
- To investigate the genetic mechanisms and gene transfer of erythromycin resistance in S. pneumoniae isolates from Denmark.
- To compare resistance patterns in invasive versus non-invasive isolates.
Main Methods:
- Antimicrobial susceptibility testing of 69 S. pneumoniae isolates (49 invasive, 20 non-invasive).
- Genotyping and serotyping of isolates.
- Study of gene transfer (transformation and conjugation) for selected isolates.
Main Results:
- The erm(B) gene was significantly more frequent in non-invasive isolates (p = 0.001).
- The mef(I) gene was detected for the first time in Denmark.
- Horizontal gene transfer of erm(B), mef(I), and mef(E) was detected; mef(I) transfer was proven for the first time.
- Clonal spread of a serotype 14 strain carrying mef(A) was observed, primarily in invasive isolates.
Conclusions:
- Horizontal spread of mef(E) and erm(B) are primary causes of erythromycin resistance in pneumococci.
- Clonal spread, particularly of a serotype 14 strain with mef(A), also contributes to invasive infections.
- The findings highlight the dynamic nature of antibiotic resistance mechanisms in S. pneumoniae.
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