Related Experiment Video
Updated: Jun 8, 2026

09:33
High-Resolution Complexome Profiling by Cryoslicing BN-MS Analysis
Published on: October 15, 2019
Assembly and solution structure of the core retromer protein complex.
Suzanne J Norwood1, Daniel J Shaw, Nathan P Cowieson
1Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Traffic (Copenhagen, Denmark)
|September 30, 2010
Summary
The retromer complex
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Retromer is a vital protein complex regulating endosomal trafficking.
- Its core comprises VPS35, VPS29, and VPS26 subunits with distinct functions.
- Understanding retromer assembly is crucial for endosomal transport research.
Purpose of the Study:
- To investigate the thermodynamics of core retromer assembly.
- To elucidate the binding interactions between VPS35, VPS29, and VPS26 subunits.
- To characterize the role of the VPS35 PRLYL motif in VPS26 interaction.
Main Methods:
- Isothermal titration calorimetry (ITC) for thermodynamic analysis.
- Heat capacity measurements to study binding interfaces and conformational changes.
- Small-angle X-ray scattering (SAXS) for structural modeling.
Main Results:
- VPS35 serves as the central subunit, with independent binding of VPS29 and VPS26.
- The VPS35 PRLYL motif is essential for direct VPS26 binding.
- Extensive binding interfaces and potential conformational changes were observed.
- A model suggests VPS35 as a platform with distal VPS29/VPS26 binding, allowing dimer formation.
Conclusions:
- VPS35 is the central scaffold for retromer core assembly.
- Specific motifs and subunit interactions dictate complex formation and stability.
- The findings provide insights into retromer's structural organization and function in trafficking.
Related Concept Videos
Protein Complex Assembly
Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types. Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Protein Complex Assembly
Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types. Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Protein Translocation Machinery on the ER Membrane
The translocon complex situated on the ER membrane is the main gateway for the protein secretory pathway. It facilitates the transport of nascent peptides into the ER lumen and their insertion into the ER membrane.
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the translocon complex.
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the translocon complex.
Protein Complexes with Interchangeable Parts
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Protein Complexes with Interchangeable Parts
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Assembly of Complex Microtubule Structures
Complex microtubule structures are present in resting cells and in dividing cells. In resting cells, they are responsible for maintaining the cellular architecture, tracks for intracellular transport, positioning of organelles, assembly of cilia and flagella. They mediate the bipolar spindle assembly for chromosomal segregation and positioning of the cell division plate in dividing cells. The formation of microtubule complex structures depends on the cell type, cell stage, and cell function.

