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Updated: Jun 5, 2026

Nucleoside Triphosphates - From Synthesis to Biochemical Characterization
Published on: April 3, 2014
A novel asymmetric di-Ni(II) system as a highly efficient functional model for phosphodiesterase: synthesis,
Yan-wei Ren1, Jia-xian Lu, Bo-wei Cai
1School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, 510640, China.
Abstract:
A novel asymmetric phenol-based 'end-off' dinucleating ligand 2-{[(2-piperidylmethyl)amino]methyl}-4-bromo-6-[(1-methylhomopiperazine-4-yl)methyl]phenol (HL) and three dinuclear nickel(II) complexes, [Ni₂L(μ-OH)] (ClO₄)₂ (1), [Ni₂L(DNBA)₂(CH₃CN)₂]BPh₄ (2) and [Ni₂L(BPP)₂(CH₃CN)₂]BPh₄ (3) have been synthesized and characterized by a variety of techniques including: NMR, infrared and UV-vis spectroscopies, mass spectrometry, elemental analysis, molar conductivity, thermal analysis, magnetochemistry and single-crystal X-ray diffractometry. The UV-vis spectrum of complex 1 exhibits a strong peak at 510 nm, a characteristic absorption of a d-d transition of the square-planar four-coordinated Ni(II) center. Utilizing this feature, the stepwise formation of mono- and dinickel centers in solution can be monitored. Phosphodiesterase activity of a dinuclear Ni(II) system (complex 1), formed in situ by a 2 : 1 mixture of Ni(2+) ions and the ligand HL, was investigated using bis(4-nitrophenyl)phosphate (BNPP) as the substrate. The pH dependence of the BNPP cleavage in water-ethanol (1 : 1, v/v) reveals a bell-shaped pH-k(obs) profile with an optimum at about pH 8.3 which is parallel to the formation of the dinuclear species [Ni₂L(μ-OH)](2+), according to the increase of the peak at 510 nm in the UV-vis absorption spectrum . These studies reveal that the di-Ni(II) system shows the highest catalytic activity reported so far, with an acceleration rate 1.28 × 10⁷ times faster than the uncatalyzed reaction. The bridging hydroxyl group in [Ni₂L(μ-OH)](2+) is responsible for the hydrolysis reaction. The possible mechanism for the BNPP cleavage promoted by di-Ni(II) system is proposed on the basis of kinetic and spectral analyses. This study provides a less common example of the asymmetric phosphodiesterase model, which is like the active sites of most native metallohydrolases.
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