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Updated: Jun 4, 2026

Development and Application of Rapamycin-regulated Tyrosine Phosphatases
Published on: September 6, 2024
Histone deacetylase inhibitors upregulate Rap1GAP and inhibit Rap activity in thyroid tumor cells
Xiaoyun Dong1, Christopher Korch, Judy L Meinkoth
1Department of Pharmacology, School of Medicine, University of Pennsylvania, Philadelphia, 19104 Pennsylvania, USA.
Abstract:
Increases in Rap activity have been associated with tumor progression. Although activating mutations in Rap have not been described, downregulation of Rap1GAP is frequent in human tumors including thyroid carcinomas. In this study, we explored whether endogenous Rap1GAP expression could be restored to thyroid tumor cells. The effects of deacetylase inhibitors and a demethylating agent, individually and in combination, were examined in four differentiated and six anaplastic thyroid carcinoma (ATC) cell lines. Treatment with the structurally distinct histone deacetylase (HDAC) inhibitors, sodium butyrate and trichostatin A, increased Rap1GAP expression in all the differentiated thyroid carcinoma cell lines and in four of the six ATC cell lines. The demethylating agent, 5-aza-deoxycytidine, restored Rap1GAP expression in one anaplastic cell line and enhanced the effects of HDAC inhibitors in a second anaplastic cell line. Western blotting indicated that Rap2 was highly expressed in human thyroid cancer cells. Importantly, treatment with HDAC inhibitors impaired Rap2 activity in both differentiated and anaplastic tumor cell lines. The mechanism through which Rap activity is repressed appears to entail effects on the expression of multiple Rap regulators, including RapGEFs and RapGAPs. These results suggest that HDAC inhibitors may provide a tractable approach to impair Rap activity in human tumor cells.
Insights
Histone deacetylase (HDAC) inhibitors can restore Rap1GAP expression in thyroid cancer cells, potentially impairing Rap activity. This suggests HDAC inhibitors may offer a new therapeutic strategy for thyroid tumors.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- Increased Rap activity is linked to tumor progression.
- Downregulation of Rap1GAP occurs frequently in human tumors, including thyroid carcinomas.
- Restoring Rap1GAP expression could be a therapeutic strategy.
Purpose of the Study:
- To investigate the restoration of endogenous Rap1GAP expression in thyroid tumor cells.
- To evaluate the effects of deacetylase inhibitors and a demethylating agent on Rap1GAP expression.
- To examine the impact of these treatments on Rap2 activity in thyroid cancer.
Main Methods:
- Treatment of differentiated and anaplastic thyroid carcinoma (ATC) cell lines with HDAC inhibitors (sodium butyrate, trichostatin A) and a demethylating agent (5-aza-deoxycytidine).
- Western blotting to assess Rap2 expression and activity.
- Analysis of Rap1GAP expression levels following treatment.
Main Results:
- HDAC inhibitors increased Rap1GAP expression in differentiated thyroid carcinoma cell lines and some ATC cell lines.
- The demethylating agent restored Rap1GAP in one ATC cell line and enhanced HDAC inhibitor effects in another.
- HDAC inhibitors impaired Rap2 activity in both differentiated and anaplastic thyroid tumor cells.
- Rap2 was highly expressed in human thyroid cancer cells.
Conclusions:
- HDAC inhibitors can restore Rap1GAP expression and impair Rap activity in thyroid tumor cells.
- Epigenetic modifications, including histone deacetylation and demethylation, influence Rap regulators.
- HDAC inhibitors represent a potential therapeutic approach for targeting Rap activity in human tumors.
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