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Updated: Jun 1, 2026

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web
Published on: July 16, 2017
Introductory bioinformatics exercises utilizing hemoglobin and chymotrypsin to reinforce the protein
Jennifer K Inlow1, Paige Miller, Bethany Pittman
1From the Department of Chemistry, Indiana State University, Terre Haute, Indiana 47809. inlow@carbon.indstate.edu.
Abstract:
We describe two bioinformatics exercises intended for use in a computer laboratory setting in an upper-level undergraduate biochemistry course. To introduce students to bioinformatics, the exercises incorporate several commonly used bioinformatics tools, including BLAST, that are freely available online. The exercises build upon the students' background knowledge of hemoglobin and chymotrypsin, and foster a better understanding of how protein sequence relates to structure and function.
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