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High-throughput DNA Extraction and Genotyping of 3dpf Zebrafish Larvae by Fin Clipping

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Data extraction, transformation, and dissemination through ZFIN.

Douglas G Howe¹, Ken Frazer, David Fashena

¹ZFIN, the Zebrafish Model Organism Database, University of Oregon, Eugene, Oregon, USA.

Methods in Cell Biology

|September 20, 2011

Summary

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Researchers can make their scientific data accessible to online databases like ZFIN. This article explains how to incorporate research data into ZFIN for better digital accessibility.

Area of Science:

Bioinformatics
Data Science
Scientific Publishing

Background:

Research data requires proper management after publication.
Digital accessibility of scientific data is crucial for reproducibility and collaboration.

Purpose of the Study:

To provide an overview of data incorporation into ZFIN (Zebrafish Information Network).
To guide researchers in making their work accessible through online databases.

Main Methods:

Describing the process of data submission to ZFIN.
Highlighting best practices for data organization and metadata.

Main Results:

ZFIN serves as a central repository for zebrafish research data.
Clear guidelines facilitate efficient data integration.

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Last Updated: May 29, 2026

High-throughput DNA Extraction and Genotyping of 3dpf Zebrafish Larvae by Fin Clipping

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Published on: June 29, 2018

Sample Preparation and Analysis of RNASeq-based Gene Expression Data from Zebrafish

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Published on: October 27, 2017

A Manual Small Molecule Screen Approaching High-throughput Using Zebrafish Embryos

A Manual Small Molecule Screen Approaching High-throughput Using Zebrafish Embryos

Published on: November 8, 2014

Conclusions:

Effective data incorporation into ZFIN enhances the visibility and usability of research findings.
Researchers are encouraged to utilize ZFIN for long-term data preservation and accessibility.