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Related Concept Videos

Three-Dimensional Microscopy in Microbiology01:28

Three-Dimensional Microscopy in Microbiology

Three-dimensional imaging techniques are essential in cell biology, allowing researchers to visualize intricate cellular structures with high resolution. Two prominent methods, Differential Interference Contrast Microscopy (DIC) and Confocal Scanning Laser Microscopy (CSLM), provide distinct advantages for imaging live and thick specimens, respectively.Differential Interference Contrast MicroscopyDIC microscopy enhances contrast in transparent, unstained samples by converting phase...
Two-Dimensional Microscopy in Microbiology01:29

Two-Dimensional Microscopy in Microbiology

Two-dimensional (2D) microscopy encompasses a range of optical techniques that capture images within a single focal plane, offering detailed representations of microscopic structures. These techniques are essential in biological and medical research, enabling the visualization of cellular and subcellular structures with different levels of contrast and specificity.There are several major types of 2D microscopy, each with strengths and applications.Bright-Field MicroscopyBright-field microscopy...
Imaging Biological Samples with Optical Microscopy01:18

Imaging Biological Samples with Optical Microscopy

Optical microscopy uses optic principles to provide detailed images of samples. Antonie van Leeuwenhoek designed the first compound optical microscope in the 17th century to visualize blood cells, bacteria, and yeast cells. In 1830, Joseph Jackson Lister created an essentially modern light microscope. The 20th century saw the development of microscopes with enhanced magnification and resolution.
In optical microscopy, the specimen to be viewed is placed on a glass slide and clipped on the stage...
Overview of Microscopy Techniques01:22

Overview of Microscopy Techniques

The early pioneers of microscopy opened a window into the invisible world of microorganisms. In 1830, Joseph Jackson Lister created an essentially modern light microscope. The 20th century saw the development of microscopes that leveraged nonvisible light, such as fluorescence microscopy that uses an ultraviolet light source and electron microscopy that uses short-wavelength electron beams. These advances significantly improved magnification, image resolution, and contrast. By comparison, the...
Electron Microscope Tomography and Single-particle Reconstruction01:07

Electron Microscope Tomography and Single-particle Reconstruction

Transmission electron microscopy (TEM) can be used to determine the 3D structure of biological samples with the help of techniques such as electron microscope tomography and single-particle reconstruction. While single-particle reconstruction can examine macromolecules and macromolecular complexes in vitro conditions only, tomography permits the study of cell components or small cells in vivo.
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...
Confocal Fluorescence Microscopy01:16

Confocal Fluorescence Microscopy

Confocal microscopy is an advanced microscopic technique. The prime advantage of the confocal microscope over other microscopy techniques is its ability to block the out-of-focus light from the illuminated samples using pinholes. It is widely used with fluorescence optics to obtain high-resolution, sharp contrast images. Unlike optical microscopes, confocal microscopes use a focused beam of light laser to scan the entire sample surface at different z-planes. These microscopes are, therefore,...

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An Analytical Tool that Quantifies Cellular Morphology Changes from Three-dimensional Fluorescence Images
10:00

An Analytical Tool that Quantifies Cellular Morphology Changes from Three-dimensional Fluorescence Images

Published on: August 31, 2012

Microscopy in 3D: a biologist's toolbox.

Robert S Fischer1, Yicong Wu, Pakorn Kanchanawong

  • 1National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD 20892, USA. fischerr2@nhlbi.nih.gov

Trends in Cell Biology
|November 4, 2011
PubMed
Summary
This summary is machine-generated.

Advanced 3D fluorescence microscopy techniques offer enhanced resolution and speed for imaging cellular structures. These methods minimize photobleaching, enabling detailed studies of living cells in 3D environments.

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Last Updated: May 28, 2026

An Analytical Tool that Quantifies Cellular Morphology Changes from Three-dimensional Fluorescence Images
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Area of Science:

  • Cellular and Molecular Imaging
  • Biophysics
  • Microscopy

Background:

  • Fluorescence microscopy is crucial for studying cellular structures and macromolecular complexes at various scales.
  • 3D imaging of living cells faces challenges in achieving high spatial/temporal resolution while minimizing photodamage.

Purpose of the Study:

  • To review advanced 3D fluorescence microscopy modalities.
  • To highlight techniques advantageous for imaging cells and subcellular structures in physiological 3D environments.

Main Methods:

  • Discussion of specific 3D fluorescence microscopy techniques.
  • Comparison with traditional point-scanning microscopy.

Main Results:

  • Recent advances provide higher resolution, improved speed, and reduced photobleaching.
  • Selected modalities offer significant advantages over conventional methods.

Conclusions:

  • Advanced 3D fluorescence microscopy is key for detailed cellular and subcellular imaging.
  • These techniques are vital for understanding biological processes in 3D.