Related Experiment Video
Updated: May 26, 2026

NMR-Based Fragment Screening in a Minimum Sample but Maximum Automation Mode
Published on: June 4, 2021
Fragment based drug discovery: practical implementation based on ¹⁹F NMR spectroscopy
John B Jordan1, Leszek Poppe, Xiaoyang Xia
1Department of Molecular Structure, Amgen, Inc., One Amgen Center Drive, Thousand Oaks, California 91320, United States. jbjordan@amgen.com
Fluorine-19 NMR (19F NMR) enables sensitive fragment-based drug discovery (FBDD) by rapidly detecting fragment hits. This method also aids in developing structure-activity relationships and assessing protein druggability.
Area of Science:
- Medicinal Chemistry
- Structural Biology
- Biophysics
Background:
- Fragment-based drug discovery (FBDD) is crucial for identifying novel therapeutics.
- Nuclear Magnetic Resonance (NMR) spectroscopy is a powerful technique for FBDD.
- Traditional proton-based NMR methods are well-established, but (19)F NMR offers unique advantages.
Purpose of the Study:
- To demonstrate the broad applicability of (19)F NMR-based fragment screening.
- To highlight (19)F NMR as a tool for sensitive fragment hit detection.
- To showcase its utility in structure-activity relationship (SAR) development and druggability assessment.
Main Methods:
- Utilizing (19)F NMR for fragment screening against protein targets.
- Applying (19)F NMR for rapid SAR development using diverse compound libraries.
- Employing (19)F NMR to evaluate the druggability of protein targets.
Main Results:
- Demonstrated sensitive detection of fragment hits using (19)F NMR.
- Showcased rapid SAR development from hit to lead stage.
- Provided efficient assessment of target protein druggability.
Conclusions:
- (19)F NMR-based fragment screening offers a versatile and efficient approach in drug discovery.
- This technique facilitates sensitive hit identification, rapid lead optimization, and target druggability evaluation.
- (19)F NMR expands the utility of fragment screening beyond targeting specifically "fluorophilic" protein sites.
Related Concept Videos
Applications Of NMR In Biology
The...
Drug Discovery: Overview
Two-Dimensional (2D) NMR: Overview
The first step is the preparation period, during which nucleus A is excited with a radiofrequency pulse.
Other Nuclides: 31P, 19F, 15N NMR
While fluorine-19 and phosphorous-31 have high natural abundances (100%) and positive gyromagnetic ratios, nitrogen-15 has a low natural abundance and a negative gyromagnetic ratio. However, nitrogen-15 is still preferred over nitrogen-14 (which has a high...
NMR Spectroscopy of Aromatic Compounds
2D NMR: Overview of Homonuclear Correlation Techniques
COSY90 is the standard two-dimensional (2D) COSY experiment that...

