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A novel HLA-A*31 allele, A*31:57, identified by sequence-based typing

A H Lim1, S N Song, J Y Lee

  • 1Blood Transfusion Research Institute, Korean Red Cross, Seoul, Korea.

Tissue Antigens
|April 12, 2012
PubMed

Abstract:

The novel allele A*31:57 allele showed a single nucleotide difference with A*31:01:02 at nt 235 G>C in exon 2.

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Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
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