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mirMachine: A One-Stop Shop for Plant miRNA Annotation
Published on: May 1, 2021
Evidence for a cytoplasmic microprocessor of pri-miRNAs
Jillian S Shapiro1, Ryan A Langlois, Alissa M Pham
1Department of Microbiology, Mount Sinai School of Medicine, New York, New York 10029, USA.
Summary
Virus infection triggers Drosha enzyme relocation to the cytoplasm, enabling the processing of viral microRNAs (miRNAs) without affecting host miRNAs. This reveals a novel cytoplasmic function for Drosha in viral RNA processing.
Area of Science:
- Molecular Biology
- Virology
- RNA Biology
Background:
- MicroRNAs (miRNAs) are key regulators of gene expression via post-transcriptional silencing.
- Canonical miRNA biogenesis initiates in the nucleus with the microprocessor complex.
- Noncanonical miRNA biogenesis pathways, including cytoplasmic processing, are less understood.
Purpose of the Study:
- To characterize the molecular mechanisms and components involved in processing virus-derived cytoplasmic primary miRNAs (c-pri-miRNAs).
- To investigate the role of Drosha, a nuclear RNase III enzyme, in cytoplasmic miRNA processing during viral infection.
Main Methods:
- RNA in situ hybridization to visualize RNA localization.
- Inhibition of cellular division to assess nuclear involvement.
- Genetic studies to determine enzyme dependencies.
- Deep sequencing to analyze miRNA profiles.
Main Results:
- Virus infection induced Drosha relocalization from the nucleus to the cytoplasm.
- c-pri-miRNA processing occurred independently of nuclear involvement but required Drosha.
- Cytoplasmic Drosha facilitated robust viral miRNA synthesis without altering endogenous miRNA levels.
Conclusions:
- Drosha exhibits a novel cytoplasmic function in processing viral-derived, highly structured RNAs during infection.
- This noncanonical pathway allows for efficient viral miRNA production in the cytoplasm.
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