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Related Concept Videos

Computed Tomography01:10

Computed Tomography

Tomography refers to imaging by sections. Computed tomography (CT) is a non-invasive imaging technique that uses computers to analyze several cross-sectional X-rays to reveal minute details about structures in the body.
The technique was invented in the 1970s and is based on the principle that as X-rays pass through the body, they are absorbed or reflected at different levels. In the technique, a patient lies on a motorized platform while a computerized axial tomography (CAT) scanner rotates...
Electron Microscope Tomography and Single-particle Reconstruction01:07

Electron Microscope Tomography and Single-particle Reconstruction

Transmission electron microscopy (TEM) can be used to determine the 3D structure of biological samples with the help of techniques such as electron microscope tomography and single-particle reconstruction. While single-particle reconstruction can examine macromolecules and macromolecular complexes in vitro conditions only, tomography permits the study of cell components or small cells in vivo.
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...
Imaging Studies III: Computed Tomography01:27

Imaging Studies III: Computed Tomography

DefinitionComputed Tomography (CT) of the genitourinary (GU) tract is a non-invasive imaging modality that utilizes X-rays and computer processing to generate detailed cross-sectional images of the urinary system, encompassing the kidneys, ureters, bladder, and adjacent structures such as the adrenal glands.PurposeCT scans of the GU tract serve several diagnostic and therapeutic purposes, including:Diagnosis of Urinary Tract Diseases: Detects kidney stones, tumors, cysts, and congenital...

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Related Experiment Video

Updated: May 17, 2026

High Resolution 3D Imaging of Ex-Vivo Biological Samples by Micro CT
08:57

High Resolution 3D Imaging of Ex-Vivo Biological Samples by Micro CT

Published on: June 21, 2011

Regridding reconstruction algorithm for real-time tomographic imaging.

F Marone1, M Stampanoni

  • 1Swiss Light Source, Paul Scherrer Institut, Villigen, Switzerland. federica.marone@psi.ch

Journal of Synchrotron Radiation
|October 25, 2012
PubMed
Summary
This summary is machine-generated.

A new algorithm, gridrec, enables fast tomographic microscopy reconstruction. This addresses data bottlenecks, allowing real-time monitoring of ultrafast synchrotron imaging.

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Area of Science:

  • Synchrotron radiation science
  • Advanced imaging techniques
  • Computational microscopy

Background:

  • Third-generation synchrotron sources enable sub-second temporal-resolution tomographic microscopy.
  • High data rates (near 10 GB/s) create significant data handling and post-processing bottlenecks.
  • Existing reconstruction algorithms hinder the full exploitation of ultrafast acquisition speeds.

Purpose of the Study:

  • To present the fast reconstruction algorithm gridrec, optimized for conventional CPU technology.
  • To demonstrate gridrec as a viable alternative to standard filtered back-projection methods.
  • To address the data processing bottleneck in high-speed tomographic microscopy.

Main Methods:

  • Implementation of the gridrec algorithm, based on Fourier transform methods.
  • Utilizing a regridding procedure for resampling Fourier space from polar to Cartesian coordinates.
  • Performance and accuracy comparison against standard filtered back-projection routines.

Main Results:

  • Gridrec offers a valuable alternative to filtered back-projection with negligible accuracy degradation.
  • The algorithm achieves up to a 20-fold performance increase.
  • Gridrec's signal-to-noise ratio superiority in well-sampled tomographic problems was demonstrated.

Conclusions:

  • Gridrec overcomes data processing bottlenecks in high-speed tomographic microscopy.
  • The algorithm enables real-time monitoring of sub-second acquisition processes.
  • Gridrec facilitates the full potential of ultrafast synchrotron imaging.