Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Genomics02:02

Genomics

Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
Health Information Technology and Healthcare Information System01:30

Health Information Technology and Healthcare Information System

Health Information Technology (HIT)
Health Information Technology, commonly called HIT, integrates advanced information systems and technology in healthcare settings. Its primary functions include:
Issues And Trends In Healthcare Delivery System01:29

Issues And Trends In Healthcare Delivery System

The issues and trends in healthcare delivery are constantly changing. The COVID-19 pandemic is one recent issue that wreaked havoc on healthcare systems, causing a shortage of healthcare workers, high demand for medicines and supplies, and increased medical expenditure due to a lack of insurance. Other issues include rising healthcare costs and care fragmentation.
Cost Containment
Payment for healthcare services has historically promoted adoption of costly and often unnecessary or inefficient...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Prediction of Coal Spontaneous Combustion Risk under Poor Oxygen Concentration Based on Fuzzy Clustering and Lattice Tightness.

ACS omega·2026
Same author

Multi-omics analysis identifies key genes and functional loci affecting teat number in American Large White and Landrace pigs and their application in optimizing genomic selection models.

BMC genomics·2026
Same author

Elevations in Donor-Derived Cell-Free DNA and Allograft Outcomes in Kidney Transplantation.

Journal of the American Society of Nephrology : JASN·2026
Same author

Optimizing post-transplantation detection of subcutaneously transplanted islets using dithizone staining.

BMC methods·2026
Same author

Regional immunity in the respiratory tract: challenges and opportunities.

Science bulletin·2026
Same author

Correction: Elevated IL-17A level is associated with poor overall survival following immune checkpoint inhibitors combined with targeted therapy in hepatocellular carcinoma with hyperbilirubinemia.

Frontiers in immunology·2026
Same journal

Leveraging Vulnerabilities in Temporal Graph Neural Networks via Strategic High-Impact Assaults.

Proceedings of the ... ACM International Conference on Information & Knowledge Management. ACM International Conference on Information and Knowledge Management·2026
Same journal

MUSE: A Multi-slice Joint Analysis Method for Spatial Transcriptomics Experiments.

Proceedings of the ... ACM International Conference on Information & Knowledge Management. ACM International Conference on Information and Knowledge Management·2026
Same journal

Backdoor in Seconds: Unlocking Vulnerabilities in Large Pre-trained Models via Model Editing.

Proceedings of the ... ACM International Conference on Information & Knowledge Management. ACM International Conference on Information and Knowledge Management·2025
Same journal

Enhanced Privacy Bound for Shuffle Model with Personalized Privacy.

Proceedings of the ... ACM International Conference on Information & Knowledge Management. ACM International Conference on Information and Knowledge Management·2025
Same journal

Continually-Adaptive Representation Learning Framework for Time-Sensitive Healthcare Applications.

Proceedings of the ... ACM International Conference on Information & Knowledge Management. ACM International Conference on Information and Knowledge Management·2025
Same journal

Causality-Aware Spatiotemporal Graph Neural Networks for Spatiotemporal Time Series Imputation.

Proceedings of the ... ACM International Conference on Information & Knowledge Management. ACM International Conference on Information and Knowledge Management·2025
See all related articles

Related Experiment Video

Updated: May 14, 2026

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
07:35

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports

Published on: October 13, 2023

Enabling Ontology Based Semantic Queries in Biomedical Database Systems.

Shuai Zheng1, Fusheng Wang, James Lu

  • 1Mathematics and Computer Science Department, Emory University, Atlanta, Georgia, USA.

Proceedings of the ... ACM International Conference on Information & Knowledge Management. ACM International Conference on Information and Knowledge Management
|February 14, 2013
PubMed
Summary
This summary is machine-generated.

DBOntoLink unifies semantic query interfaces for biomedical databases, overcoming model and query mismatches. This enables direct, programming-free ontology-based semantic queries for enhanced data retrieval.

Keywords:
Ontologyquery languages

More Related Videos

A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions
07:40

A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions

Published on: May 27, 2021

Related Experiment Videos

Last Updated: May 14, 2026

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
07:35

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports

Published on: October 13, 2023

A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions
07:40

A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions

Published on: May 27, 2021

Area of Science:

  • Biomedical Informatics
  • Database Management
  • Ontology Engineering

Background:

  • Current biomedical ontology repositories have limited query capabilities.
  • Semantic queries in annotated biomedical databases are challenging due to model and interface mismatches.
  • Existing systems hinder direct ontology-based semantic querying.

Purpose of the Study:

  • To develop a unified system for ontology-based semantic queries in biomedical databases.
  • To address the limitations of current query interfaces and data models.
  • To facilitate natural specification of semantic queries without programming.

Main Methods:

  • Developed DBOntoLink, a system extending database query languages.
  • Created unified semantic query interfaces.
  • Ensured adaptability to various ontologies via customization.
  • Supported major biomedical ontologies from NCBO BioPortal.

Main Results:

  • DBOntoLink enables direct and natural semantic query specification.
  • The system overcomes mismatches between ontology and database models and interfaces.
  • Demonstrated DBOntoLink's utility in a real-world biomedical database with medical image annotations.

Conclusions:

  • DBOntoLink provides a robust solution for ontology-based semantic querying in biomedical databases.
  • The system simplifies data retrieval and enhances the usability of semantically annotated data.
  • Facilitates seamless integration of ontologies with biomedical databases for advanced data analysis.