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Published on: May 15, 2020
Probabilistic case detection for disease surveillance using data in electronic medical records
Fuchiang Tsui1, Michael Wagner, Gregory Cooper
1Center for Advanced Study of Informatics in Public Health, Department of Biomedical Informatics, University of Pittsburgh.
A new case detection system (CDS) accurately identifies influenza and influenza-like illness using Bayesian networks and natural language processing. This system achieved high diagnostic accuracy from emergency department notes and lab results.
Area of Science:
- Medical Informatics
- Artificial Intelligence in Medicine
- Epidemiology
Background:
- Accurate and timely detection of influenza and influenza-like illness (ILI) is crucial for public health management.
- Traditional diagnostic methods can be time-consuming and may not capture the full clinical picture.
- Emergency department (ED) data offers a rich source for real-time disease surveillance.
Purpose of the Study:
- To develop and evaluate a probabilistic case detection system (CDS) for influenza and ILI.
- To leverage Bayesian network modeling and natural language processing (NLP) for enhanced diagnostic accuracy.
- To assess the performance of the CDS using emergency department dictated notes and laboratory results.
Main Methods:
- Development of a Bayesian network model for medical diagnosis.
- Integration of natural language processing (NLP) to extract relevant information from dictated ED notes.
- Computation of posterior probabilities for influenza and ILI.
- Validation of diagnostic accuracy using the area under the Receiver Operating Characteristic (ROC) curve.
Main Results:
- The case detection system (CDS) demonstrated high diagnostic accuracy for influenza and ILI.
- The area under the ROC curve for diagnostic accuracy reached 0.97.
- The overall accuracy of the natural language processing (NLP) component within the CDS was 0.91.
Conclusions:
- The developed probabilistic case detection system (CDS) is highly accurate in identifying influenza and ILI.
- The combination of Bayesian networks and NLP provides a powerful tool for syndromic surveillance.
- This approach can significantly improve the efficiency and accuracy of influenza case detection in emergency departments.
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