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Published on: September 7, 2022
[Human rhinovirus with different genotypes in children with acute respiratory tract infections in Beijing]
Ming-Hui Song1, Lin-Qing Zhao, Yuan Qian
1Laboratory of Virology, Capital Institute of Pediatrics, Beijing 100020, China. mdjsongminghui@sina.com
Insights
Human rhinoviruses (HRVs), particularly HRV-C, are significant causes of acute respiratory infections (ARI) in Beijing children. This study found HRV-C prevalence similar to HRV-A, highlighting their importance in pediatric respiratory illness.
Area of Science:
- Virology
- Molecular Biology
- Pediatrics
Context:
- Acute respiratory infections (ARI) pose a significant health burden in children.
- Human rhinoviruses (HRVs) are common viral pathogens implicated in ARI.
- Understanding HRV genotype distribution and characteristics is crucial for public health.
Purpose:
- To investigate the prevalence and molecular characteristics of different human rhinovirus (HRV) genotypes (A, B, and C) in children with ARI in Beijing.
- To specifically assess the role of HRV-C in pediatric respiratory infections.
Summary:
- A study of 703 respiratory specimens from children with ARI in Beijing identified 54 (7.7%) HRV-positive cases.
- HRV-A accounted for 46.3%, HRV-C for 38.9%, and HRV-B for 14.8% of HRV infections.
- HRV infections were most common in children under 5 years old, with the highest rate in infants under 1 year. Common diagnoses included bronchiolitis and asthma.
Impact:
- HRVs, especially HRV-C, are identified as important pathogens contributing to pediatric ARI in Beijing.
- The findings reveal a significant prevalence of HRV-C, comparable to HRV-A and exceeding HRV-B.
- High sequence variability among different HRV genotypes was observed, underscoring the need for ongoing molecular surveillance.
Abstract:
To understand the infections and molecular biological characteristics of different human rhinovirus (HRV) genotypes -A, B, C, especially C in children with acute respiratory tract infections (ARI) in Beijing. Seven hundreds and three respiratory tract specimens were collected from children with ARI during Jan. 2011 to Dec. 2011. Semi-nested PCR was developed for detecting HRVs. Gene fragment of VP4/VP2 capsid protein amplified from HRV positive specimens was sequenced and analyzed by software DNAStar, the phylogenetic tree was then constructed by MEGA 5. 05. Among these 703 specimens tested, 54 (7.7%, 54/703) were HRV positive, including 25 (46.3%, 25/54) positive for HRV-A, 8 (14. 8%, 8/54) for HRV-B, 21 (38. 9%, 21/54) for HRV-C determined by sequence analysis. Most of these children (94. 4%00, 51/54) infected with HRVs were younger than 5 years old, and the highest positive rate was shown in group younger than 1 year (11. 4%). These patients positive for HRVs were diagnosed as bronchiolitis (23.1%), asthma (20.0%), pneumonia (1.0%), bronchitis (4.4%) and upper respiratory tract infections (4. 1%). Sequence analysis of VP4/VP2 gene fragment revealed that 70. 0% to 100. 0% nucleotide identity was shown among the sequences within the same HRV genotype, and 55. 5% to 65. 8% nucleotide identity among the sequences from different HRV genotypes. In conclusion, HRVs, especially HRV-C, are important pathogens for children with ARI in Beijing. The prevalence of HRV-C is similar to that of HRV-A, higher than that of HRV-B. High sequence variation among different HRV genotypes was indicated in this study.
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