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Related Concept Videos

Proteomics01:33

Proteomics

A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term proteomics...
Key Elements for Plant Nutrition02:35

Key Elements for Plant Nutrition

Like all living organisms, plants require organic and inorganic nutrients to survive, reproduce, grow and maintain homeostasis. To identify nutrients that are essential for plant functioning, researchers have leveraged a technique called hydroponics. In hydroponic culture systems, plants are grown—without soil—in water-based solutions containing nutrients. At least 17 nutrients have been identified as essential elements required by plants. Plants acquire these elements from the atmosphere, the...
Inorganic Nitrogen Assimilation01:22

Inorganic Nitrogen Assimilation

Nitrogen is an essential element in biological systems, forming a crucial component of proteins, nucleic acids, and other cellular constituents. Many bacteria and archaea acquire nitrogen in the form of nitrate (NO₃⁻) or ammonia (NH₃), which are then assimilated into biomolecules through specific enzymatic pathways.Assimilatory Nitrate ReductionWhen nitrate enters the cell, it undergoes a two-step reduction process known as assimilatory nitrate reduction. Initially, the enzyme nitrate reductase...

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Related Experiment Video

Updated: May 8, 2026

Polysome Purification from Soybean Symbiotic Nodules
07:02

Polysome Purification from Soybean Symbiotic Nodules

Published on: July 1, 2022

Proteomics and the analysis of nodulation.

Nijat Imin1

  • 1Plant Science Division, Research School of Biology, College of Medicine, Biology and Environment, The Australian National University, Canberra, ACT, Australia.

Methods in Molecular Biology (Clifton, N.J.)
|September 3, 2013
PubMed
Summary

Proteomics is vital for understanding gene function, especially with posttranslational modifications. This study details gel-based proteomics for quantifying proteins and modifications in plant nodules.

Area of Science:

  • Plant biology
  • Proteomics
  • Molecular biology

Background:

  • Gene function understanding requires protein-level analysis.
  • Protein accumulation often poorly correlates with transcript levels.
  • Posttranslational modifications significantly impact protein function and plant responses.

Purpose of the Study:

  • To describe gel-based quantitative and comparative proteomics.
  • To highlight the detection, quantification, and characterization of proteins and posttranslational modifications.
  • To focus on nodule sample analysis while noting broader applicability.

Main Methods:

  • Two-dimensional gel electrophoresis (2D-PAGE).
  • Mass spectrometry (MS) analysis.
  • Combining 2D-PAGE with MS for quantitative and comparative proteomics.

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Identification of Post-translational Modifications of Plant Protein Complexes
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Identification of Post-translational Modifications of Plant Protein Complexes

Published on: February 22, 2014

mRNA Interactome Capture from Plant Protoplasts
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mRNA Interactome Capture from Plant Protoplasts

Published on: July 28, 2017

Related Experiment Videos

Last Updated: May 8, 2026

Polysome Purification from Soybean Symbiotic Nodules
07:02

Polysome Purification from Soybean Symbiotic Nodules

Published on: July 1, 2022

Identification of Post-translational Modifications of Plant Protein Complexes
10:07

Identification of Post-translational Modifications of Plant Protein Complexes

Published on: February 22, 2014

mRNA Interactome Capture from Plant Protoplasts
12:29

mRNA Interactome Capture from Plant Protoplasts

Published on: July 28, 2017

Main Results:

  • The described method enables detection and quantification of proteins.
  • Posttranslational modifications can be characterized.
  • The approach is effective for analyzing nodule proteomes.

Conclusions:

  • Gel-based proteomics is a powerful tool for plant research.
  • This method aids in understanding gene function and protein roles.
  • The technique is adaptable for various plant tissue types.