Related Experiment Video
Updated: May 7, 2026

12:04
Interactome-Seq: A Protocol for Domainome Library Construction, Validation and Selection by Phage Display and Next Generation Sequencing
Published on: October 3, 2018
Targeting mammalian organelles with internalizing phage (iPhage) libraries
Roberto Rangel1, Andrey S Dobroff, Liliana Guzman-Rojas
1David H. Koch Center, The University of Texas M.D. Anderson Cancer Center, Houston, Texas, USA.
Nature Protocols
|September 14, 2013
Summary
Internalizing phage (iPhage) technology overcomes limitations in studying protein interactions and discovering intracellular receptors. This novel platform enables efficient screening of organelle ligands and receptors in living cells within eight weeks.
Area of Science:
- Biotechnology
- Molecular Biology
- Cell Biology
Background:
- Traditional methods like yeast two-hybrid and affinity-capture complex purification for protein interaction studies face limitations such as protein insolubility and transient interactions.
- These limitations can lead to inaccurate data sets in the discovery of intracellular receptors and protein interactions.
Purpose of the Study:
- To introduce and describe a novel technology, internalizing phage (iPhage), for overcoming limitations in protein interaction studies and intracellular receptor discovery.
- To present iPhage as a versatile platform for combinatorial intracellular targeting, functional protein domain fingerprinting, and potential applications in vaccine development and therapeutic agent engineering.
Main Methods:
- Development and explanation of iPhage vectors and libraries, focusing on design, cloning, construction, and production.
- Utilizing a ligand/receptor-independent mechanism for iPhage particles to penetrate eukaryotic cells.
- Basic methodologies for ligand-receptor identification and validation of organelle receptors.
Main Results:
- iPhage particles offer a unique discovery platform for intracellular targeting of organelle ligands and their corresponding receptors.
- The technology allows for fingerprinting functional protein domains within living cells.
- Screening of iPhage libraries can be completed in approximately eight weeks.
Conclusions:
- iPhage technology provides a robust and efficient tool for studying protein interactions and discovering intracellular receptors, overcoming limitations of existing methods.
- This platform facilitates targeted discovery of organelle-specific interactions and functional protein domains in a cellular context.
- The rapid screening capability of iPhage libraries accelerates the pace of biological discovery and potential therapeutic development.
Related Concept Videos
DNA Bacteriophages
Bacteriophages, or phages, are viruses that specifically infect bacteria, utilizing their genetic material to hijack host cellular machinery for replication. DNA bacteriophages employ single-stranded DNA (ssDNA) or double-stranded DNA (dsDNA) genomes. These phages exhibit diverse replication strategies and host interactions, influencing their ecological roles and applications in biotechnology and medicine.ssDNA BacteriophagesssDNA phages, with their small genomes, utilize unique strategies to...
Lytic Cycle of Bacteriophages
Bacteriophages, also known as phages, are specialized viruses that infect bacteria. A key characteristic of phages is their distinctive “head-tail” morphology. A phage begins the infection process (i.e., lytic cycle) by attaching to the outside of a bacterial cell. Attachment is accomplished via proteins in the phage tail that bind to specific receptor proteins on the outer surface of the bacterium. The tail injects the phage’s DNA genome into the bacterial cytoplasm. In the lytic replication...

