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Updated: May 6, 2026

Purification of Viral DNA for the Identification of Associated Viral and Cellular Proteins
Published on: August 31, 2017
Isolation and characterization of the herpes simplex virus 1 terminase complex
Jason D Heming1, Jamie B Huffman, Lisa M Jones
1Department of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Herpes simplex virus 1 (HSV-1) terminase complex assembly and function were studied using tandem-affinity purification. Key protein domains are essential for cleavage and packaging, but not for initial complex formation.
Area of Science:
- Virology
- Molecular Biology
- Protein Biochemistry
Background:
- Herpes simplex virus 1 (HSV-1) infection involves procapsid assembly and genome packaging by the terminase complex.
- The terminase complex consists of HSV-1 UL15, UL28, and UL33 proteins.
- Previous studies faced challenges in purifying the intact terminase complex for biochemical analysis.
Purpose of the Study:
- To isolate and characterize the intact HSV-1 terminase complex.
- To investigate the roles of specific protein domains in terminase function.
- To elucidate the assembly and functional requirements of the viral terminase.
Main Methods:
- Tandem-affinity purification (TAP) of terminase complexes using recombinant viruses expressing NTAP-UL28 fusion proteins.
- Mass spectrometry, Western blotting, and silver staining for protein identification.
- Sucrose density gradient ultracentrifugation to determine complex oligomeric state.
- Generation and analysis of recombinant viruses with mutations in conserved UL15 and UL28 domains.
Main Results:
- The intact UL15-UL28-UL33 heterotrimer was successfully isolated and identified.
- The C terminus of UL28 is crucial for interaction with UL15 and UL33.
- Conserved residues in the UL28 metal-binding domain and UL15 nuclease domain are vital for cleavage and packaging functions.
- These conserved domains are not required for the initial assembly of the terminase complex.
Conclusions:
- The study successfully purified and characterized the HSV-1 terminase complex, revealing its heterotrimeric structure.
- Specific conserved domains within UL15 and UL28 are critical for the catalytic functions of DNA cleavage and packaging.
- Terminase complex assembly is independent of the functional domains required for cleavage and packaging, suggesting distinct regulatory mechanisms.
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