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Updated: May 5, 2026

Application of Optical Coherence Tomography to a Mouse Model of Retinopathy
Published on: January 12, 2022
Quantitative comparison of analysis methods for spectroscopic optical coherence tomography.
Nienke Bosschaart1, Ton G van Leeuwen, Maurice C G Aalders
1Biomedical Engineering and Physics, Academic Medical Center, University of Amsterdam, P.O Box 22700, NL-1100 DE Amsterdam, The Netherlands.
Spectroscopic optical coherence tomography (sOCT) analysis methods were compared. The short time Fourier transform (STFT) method is optimal for quantifying hemoglobin and oxygen saturation in tissues.
Area of Science:
- Biomedical Optics
- Medical Imaging
Background:
- Spectroscopic optical coherence tomography (sOCT) is crucial for mapping chromophore concentrations and enhancing tissue image contrast.
- Accurate depth-resolved spectral acquisition in sOCT relies on analysis methods balancing spectral/spatial resolution and spectral recovery.
Purpose of the Study:
- To quantitatively compare available sOCT spectral analysis methods.
- To determine the optimal method for localized chromophore quantification in biological tissues.
Main Methods:
- Simulations in tissue-like media were performed.
- Methods evaluated include short time Fourier transform (STFT), wavelet transforms, Wigner-Ville distribution, and dual window method.
Main Results:
- All evaluated methods exhibit a trade-off between spectral and spatial resolution.
- The STFT method demonstrated superior performance in the simulations.
Conclusions:
- The STFT method is the optimal choice for sOCT applications requiring localized quantification of hemoglobin concentration and oxygen saturation.
- Understanding spectral/spatial resolution trade-offs is critical for selecting appropriate analysis techniques in sOCT.
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