Comparative genomic analysis at the PATRIC, a bioinformatic resource center
Alice R Wattam1, Joseph L Gabbard, Maulik Shukla
1Virginia Bioinformatics Institute, Virginia Tech, 1015 Life Science Circle, Blacksburg, VA, 24061, USA, wattam@vbi.vt.edu.
Abstract:
The Pathosystems Resource Integration Center (PATRIC) is a genomics-centric relational database and bioinformatics resource designed to assist scientists in infectious-disease research. This method paper provides detailed instructions on using this resource to finding data specific to genomes, saving it in a personalized workspace and using a variety of interactive tools to analyze that data. While PATRIC contains many diverse tools and functionalities to explore both genome-scale and gene expression data, the main focus of this chapter is on comparative analysis of bacterial genomes.
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