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Updated: Apr 23, 2026

Correlative Light and Electron Microscopy CLEM as a Tool to Visualize Microinjected Molecules and their Eukaryotic Sub-cellular Targets
Published on: May 4, 2012
Live-cell CLEM of subcellular targets: an optimized procedure for polymer-based imaging substrates
Benjamin S Padman1, Georg Ramm1
1Department of Biochemistry and Molecular Biology, Monash University, Melbourne, Victoria, Australia; Monash Micro Imaging, Monash University, Melbourne, Victoria, Australia.
This study presents a new protocol for live-cell correlative light and electron microscopy (CLEM). It enables precise 3D relocalization of cellular structures for ultrastructural analysis after laser manipulation.
Area of Science:
- Cell Biology
- Microscopy Techniques
Background:
- Live-cell microscopy allows visualization of dynamic biological processes.
- Correlative light and electron microscopy (CLEM) bridges optical and ultrastructural imaging.
- 3D relocalization of cellular compartments after electron microscopy (EM) preparation is challenging.
Purpose of the Study:
- To develop a detailed protocol for live-cell CLEM with straightforward 3D relocalization.
- To enable correlation of live-cell imaging with high-resolution ultrastructural analysis.
Main Methods:
- Utilized TOPAS polymer film as an imaging substrate.
- Employed toner particles for 2D tracking and fiducial markers for 3D relocation.
- Demonstrated the method by laser microirradiating a mitochondrion and analyzing its ultrastructure via transmission electron microscopy (TEM).
Main Results:
- Successfully established a protocol for live-cell CLEM facilitating 3D relocalization.
- Demonstrated the ability to observe ultrastructural changes in targeted organelles, such as mitochondria, after laser treatment.
- The method is compatible with standard inverted optical microscopes.
Conclusions:
- The developed live-cell CLEM protocol simplifies 3D relocalization of intracellular structures.
- This technique allows for the correlation of dynamic live-cell events with detailed ultrastructural changes.
- The method provides a valuable tool for studying cellular responses at the ultrastructural level.
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