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Updated: Apr 19, 2026

Following the Dynamics of Structural Variants in Experimentally Evolved Populations
Published on: February 3, 2023
Path-integral calculation for the emergence of rapid evolution from demographic stochasticity
Hong-Yan Shih1, Nigel Goldenfeld1
1Loomis Laboratory of Physics, Department of Physics, Center for the Physics of Living Cells and Institute for Genomic Biology, University of Illinois at Urbana-Champaign, 1110 West Green Street, Urbana, Illinois 61801-3080, USA.
Abstract:
Genetic variation in a population can sometimes arise so fast as to modify ecosystem dynamics. Such phenomena have been observed in natural predator-prey systems and characterized in the laboratory as showing unusual phase relationships in population dynamics, including a π phase shift between predator and prey (evolutionary cycles) and even undetectable prey oscillations compared to those of the predator (cryptic cycles). Here we present a generic individual-level stochastic model of interacting populations that includes a subpopulation of low nutritional value to the predator. Using a master equation formalism and by mapping to a coherent state path integral solved by a system-size expansion, we show that evolutionary and cryptic quasicycles can emerge generically from the combination of intrinsic demographic fluctuations and clonal mutations alone, without additional biological mechanisms.
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