Cell cycle staging of individual cells by fluorescence microscopy
Vassilis Roukos1, Gianluca Pegoraro2, Ty C Voss3
1National Cancer Institute, National Institutes of Health (NIH), Bethesda, Maryland, USA.
Nature Protocols
|January 31, 2015
Summary
This study presents a new method for determining individual cell cycle stages using DNA content measurement via fluorescence microscopy. This approach allows for precise cell cycle analysis without genetic modification or population averaging.
Area of Science:
- Cell Biology
- Microscopy
- Biophysics
Background:
- Cell cycle progression is fundamental to cellular life.
- Traditional cell cycle analysis methods often require population studies, specific markers, or genetic modifications, limiting individual cell analysis.
- Determining cell cycle stage in individual, unperturbed cells remains a challenge.
Purpose of the Study:
- To develop a protocol for determining the cell cycle stage of individual cells.
- To enable cell cycle staging using high-resolution imaging and DNA content measurement.
- To provide automated image analysis pipelines for cell cycle profiling.
Main Methods:
- Measuring DNA content in individual cells via fluorescence microscopy.
- Quantifying integrated nuclear intensity of DNA-stained cells using image analysis.
- Developing automated image analysis pipelines with commercial and open-source software.
- Adapting the protocol for adherent cells and various DNA dyes.
Main Results:
- A 1-2 day protocol for individual cell cycle staging was established.
- Accurate quantification of nuclear DNA content by image analysis was achieved.
- Automated algorithms for cell cycle profiling were provided.
- The method is compatible with multiple DNA dyes and histochemical techniques.
Conclusions:
- This fluorescence microscopy-based protocol offers a robust method for individual cell cycle staging.
- The automated image analysis pipelines facilitate precise cell cycle profiling.
- The protocol is adaptable and overcomes limitations of traditional population-based studies.


