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Updated: Mar 31, 2026

Repressing Gene Transcription by Redirecting Cellular Machinery with Chemical Epigenetic Modifiers
Published on: September 20, 2018
Metabolic Signaling to Chromatin
Shelley L Berger1, Paolo Sassone-Corsi2
1Department of Cell & Developmental Biology, Department of Biology, and Department of Genetics, Epigenetics Program, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6508.
Metabolic processes fuel chromatin modification through essential cofactors like NAD and acetyl-CoA. This study details cofactor biosynthesis and their regulatory roles in gene expression, aging, and circadian rhythms.
Area of Science:
- Biochemistry
- Molecular Biology
- Epigenetics
Background:
- Metabolic processes are intrinsically linked to gene regulation.
- Chromatin-modifying enzymes rely on cofactors derived from metabolism.
- Understanding this interplay is crucial for fields like aging and circadian biology.
Purpose of the Study:
- To explore the biosynthetic pathways of key metabolic cofactors.
- To elucidate the role of these cofactors in regulating chromatin.
- To examine the connection between metabolism, chromatin, and processes like aging and circadian rhythms.
Main Methods:
- Review of biochemical literature on cofactor biosynthesis.
- Analysis of metabolic pathways.
- Integration of epigenetic and metabolic data.
Main Results:
- Detailed biosynthetic pathways for nicotinamide adenine dinucleotide (NAD), acetyl coenzyme A (acetyl-CoA), S-adenosyl methionine (SAM), α-ketoglutarate, and flavin adenine dinucleotide (FAD) are presented.
- These cofactors directly influence chromatin remodeling and gene regulation.
- Circadian rhythms and aging serve as key examples of this metabolic-epigenetic interaction.
Conclusions:
- Metabolic pathways provide essential cofactors that regulate chromatin structure and function.
- This metabolic regulation of epigenetics is fundamental to cellular processes, including aging and circadian rhythms.
- The study highlights an emerging interdisciplinary field at the intersection of metabolism and epigenetics.
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