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Updated: Mar 31, 2026

From a Natural Product to Its Biosynthetic Gene Cluster: A Demonstration Using Polyketomycin from Streptomyces diastatochromogenes Tü6028
Published on: January 13, 2017
Bioactive natural products from novel microbial sources.
Victoria L Challinor1, Helge B Bode1,2
1Merck Stiftungsprofessur für Molekulare Biotechnologie, Fachbereich Biowissenschaften, Goethe Universität Frankfurt, Frankfurt am Main, Germany.
New bacterial sources, including human microbiome residents, offer untapped potential for discovering novel antibiotics to combat antibiotic resistance. Exploiting these microbes could usher in a new era of microbial therapeutics.
Area of Science:
- Microbiology
- Natural Product Chemistry
- Drug Discovery
Background:
- The urgent threat of antibiotic resistance necessitates the discovery of new antimicrobial compounds.
- Despite their potential, only a limited number of bacterial genera have been explored for natural product mining.
- Genome sequencing reveals that natural product biosynthesis is a widespread capability among bacteria.
Purpose of the Study:
- To highlight under-explored bacterial groups as promising sources for novel natural products.
- To emphasize the potential of microbial natural products in addressing antibiotic resistance.
- To advocate for the exploitation of diverse bacterial communities for therapeutic discoveries.
Main Methods:
- Review of existing literature on bacterial natural product biosynthesis.
- Identification of key bacterial groups (e.g., anaerobes, pathogens, symbionts) with potential for novel compound production.
- Discussion of advances in natural product research methodologies.
Main Results:
- Genome data indicates a vast, unexploited reservoir of natural product-producing bacteria.
- Bacteria from the human microbiome represent a significant, untapped resource for antibiotic discovery.
- Specific examples of promising bacterial sources including human, insect, and nematode symbionts are presented.
Conclusions:
- Diverse bacterial communities, including those in the human microbiome, are critical untapped resources for novel natural products.
- Targeted exploitation of these producer strains, coupled with advanced research methods, can drive the discovery of new microbial therapeutics.
- This approach holds the potential to initiate a new era in the development of treatments for infectious diseases.
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