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Updated: Mar 29, 2026

Generating Whole Bacterial Genomes from Clinical Samples using a Target Enrichment Workflow
Published on: August 15, 2025
[Modern diagnosis of sexually transmitted diseases]
1Klinik für Dermatologie, Venerologie und Allergologie, Zentrum für Sexuelle Gesundheit und Medizin, Ruhr-Universität Bochum, Gudrunstr. 56, 44791, Bochum, Deutschland. n.brockmeyer@derma.de.
Abstract:
Diagnosis of sexually transmitted diseases (STD) has significantly improved in recent years by the application of nucleic acid amplification tests (NAAT). In addition to detection of infectious agents, molecular methods were also used for characterization of pathogens (typing, genotypic resistance testing). In contrast to conventional Sanger sequencing of amplicons, new sequencing technologies (next generation sequencing) are able to identify resistant variants that represent only small minorities in a heterogeneous population. NAATs are also available as fully automated closed systems that can be run independently of centralized laboratories and will become increasingly important for point-of-care testing.
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