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A web-based data visualization tool for the MIMIC-II database
Joon Lee1, Evan Ribey2, James R Wallace3
1School of Public Health and Health Systems, University of Waterloo, Waterloo, ON, Canada. joon.lee@uwaterloo.ca.
BMC Medical Informatics and Decision Making
|February 6, 2016
Summary
A new web-based tool simplifies exploring the Medical Information Mart for Intensive Care II (MIMIC-II) database. This visualization tool allows researchers to easily investigate patient data without needing SQL expertise.
Area of Science:
- Medical Informatics
- Data Visualization
- Clinical Research
Background:
- The Medical Information Mart for Intensive Care II (MIMIC-II) database is a valuable resource for researchers.
- Proficiency in MIMIC-II requires SQL knowledge and schema understanding, posing challenges for clinicians and health researchers.
- Limited computer proficiency among some users hinders access to MIMIC-II data.
Purpose of the Study:
- To develop an interactive, web-based data visualization tool for MIMIC-II.
- To enable first-time MIMIC-II users to easily explore the database.
- To lower the barrier to entry for accessing and analyzing intensive care unit data.
Main Methods:
- Developed an interactive, web-based visualization tool.
- Implemented an 'Explore' feature for cohort analysis and variable distribution visualization.
- Implemented a 'Compare' feature for side-by-side cohort analysis.
Main Results:
- The tool provides 'Explore' and 'Compare' functionalities for MIMIC-II data.
- Users can visualize distributions of administrative, demographic, and clinical variables within selected cohorts.
- Experienced researchers can accelerate data exploration and reduce time spent on SQL queries.
Conclusions:
- The tool offers free, convenient preliminary investigation of MIMIC-II data.
- Researchers can quickly learn characteristics of MIMIC-II patients.
- Future work includes adding analytics capabilities and utilizing MIMIC-III data.
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