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Published on: September 25, 2019
Multi-Output Decision Trees for Lesion Segmentation in Multiple Sclerosis
Amod Jog1, Aaron Carass1, Dzung L Pham2
1Image Analysis and Communications Laboratory, The Johns Hopkins University.
Abstract:
Multiple Sclerosis (MS) is a disease of the central nervous system in which the protective myelin sheath of the neurons is damaged. MS leads to the formation of lesions, predominantly in the white matter of the brain and the spinal cord. The number and volume of lesions visible in magnetic resonance (MR) imaging (MRI) are important criteria for diagnosing and tracking the progression of MS. Locating and delineating lesions manually requires the tedious and expensive efforts of highly trained raters. In this paper, we propose an automated algorithm to segment lesions in MR images using multi-output decision trees. We evaluated our algorithm on the publicly available MICCAI 2008 MS Lesion Segmentation Challenge training dataset of 20 subjects, and showed improved results in comparison to state-of-the-art methods. We also evaluated our algorithm on an in-house dataset of 49 subjects with a true positive rate of 0.41 and a positive predictive value 0.36.
Insights
This study introduces an automated algorithm for segmenting Multiple Sclerosis (MS) lesions in brain MRI scans. The developed method offers improved accuracy for diagnosing and tracking MS progression compared to existing techniques.
Area of Science:
- Neurology
- Medical Imaging
- Computer Science
Background:
- Multiple Sclerosis (MS) is a central nervous system disease damaging the myelin sheath, leading to lesions in the brain and spinal cord.
- Magnetic Resonance (MR) imaging (MRI) is crucial for MS diagnosis and progression monitoring, with lesion volume and number being key indicators.
- Manual lesion segmentation in MRI is time-consuming and requires specialized expertise.
Purpose of the Study:
- To develop and evaluate an automated algorithm for segmenting Multiple Sclerosis (MS) lesions in MR images.
- To improve the efficiency and accuracy of MS lesion detection and delineation.
- To provide a tool for better diagnosis and tracking of MS progression.
Main Methods:
- Utilized multi-output decision trees for automated lesion segmentation in MR images.
- Algorithm evaluated on the MICCAI 2008 MS Lesion Segmentation Challenge training dataset (20 subjects).
- Performance also assessed on an in-house dataset (49 subjects).
Main Results:
- The automated algorithm demonstrated improved results compared to state-of-the-art methods on the MICCAI dataset.
- On an in-house dataset, the algorithm achieved a true positive rate of 0.41 and a positive predictive value of 0.36.
- The proposed method offers a more efficient alternative to manual lesion segmentation.
Conclusions:
- The developed automated algorithm effectively segments MS lesions in MR images.
- This approach has the potential to enhance the diagnosis and monitoring of Multiple Sclerosis.
- Further validation and refinement could lead to widespread clinical adoption.
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