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Updated: Mar 9, 2026

Quantification of Efferocytosis by Single-cell Fluorescence Microscopy
Published on: August 18, 2018
Rab17 mediates differential antigen sorting following efferocytosis and phagocytosis
Charles Yin1, Yohan Kim1, Dean Argintaru1
1Department of Microbiology and Immunology and The Centre for Human Immunology, The University of Western Ontario, Schulich School of Medicine and Dentistry, London, ON, Canada N6A 5C1.
Abstract:
Macrophages engulf and destroy pathogens (phagocytosis) and apoptotic cells (efferocytosis), and can subsequently initiate adaptive immune responses by presenting antigens derived from engulfed materials. Both phagocytosis and efferocytosis share a common degradative pathway in which the target is engulfed into a membrane-bound vesicle, respectively, termed the phagosome and efferosome, where they are degraded by sequential fusion with endosomes and lysosomes. Despite this shared maturation pathway, macrophages are immunogenic following phagocytosis but not efferocytosis, indicating that differential processing or trafficking of antigens must occur. Mass spectrometry and immunofluorescence microscopy of efferosomes and phagosomes in macrophages demonstrated that efferosomes lacked the proteins required for antigen presentation and instead recruited the recycling regulator Rab17. As a result, degraded materials from efferosomes bypassed the MHC class II loading compartment via the recycling endosome - a process not observed in phagosomes. Combined, these results indicate that macrophages prevent presentation of apoptotic cell-derived antigens by preferentially trafficking efferocytosed, but not phagocytosed, materials away from the MHC class II loading compartment via the recycling endosome pathway.
Insights
Macrophages prevent immune responses to apoptotic cells by altering antigen processing. Efferosomes, unlike phagosomes, avoid antigen presentation pathways by recruiting Rab17 and using recycling endosomes.
Area of Science:
- Immunology
- Cell Biology
Background:
- Macrophages perform phagocytosis (pathogen engulfment) and efferocytosis (apoptotic cell clearance).
- Both processes involve vesicle degradation but differ in immunogenicity, suggesting distinct antigen processing.
- Antigen presentation by macrophages is crucial for adaptive immunity.
Purpose of the Study:
- To investigate the differential processing and trafficking of antigens during phagocytosis versus efferocytosis.
- To elucidate the molecular mechanisms underlying the non-immunogenic nature of efferocytosis.
Main Methods:
- Mass spectrometry to analyze protein content of phagosomes and efferosomes.
- Immunofluorescence microscopy to visualize vesicle trafficking and protein localization.
- Tracking of engulfed material degradation and antigen presentation pathways.
Main Results:
- Efferosomes, unlike phagosomes, lacked key antigen presentation machinery proteins.
- Efferosomes recruited Rab17, a regulator of membrane recycling.
- Degraded efferosome contents were directed via recycling endosomes, bypassing the MHC class II loading compartment.
Conclusions:
- Macrophages actively prevent immune responses to apoptotic cells.
- Preferential trafficking of efferocytosed material via recycling endosomes prevents antigen presentation.
- This mechanism ensures efferocytosis is non-immunogenic, distinguishing it from phagocytosis.
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