In silico analysis sheds light on the structural basis underlying the ribotoxicity of trichothecenes-A tool for

Luca Dellafiora1, Gianni Galaverna1, Chiara Dall'Asta1

  • 1Department of Food and Drug, University of Parma, Parma, 43124 Italy.

Toxicology Letters
|February 21, 2017
PubMed

Insights

Deoxynivalenol and other trichothecenes can harm humans and animals by inhibiting protein synthesis. Molecular modeling shows specific glycosylation impairs ribosome interaction, while other forms may pose risks requiring further assessment.

Area of Science:

  • Toxicology
  • Molecular Biology
  • Computational Chemistry

Background:

  • Deoxynivalenol (DON) is a foodborne mycotoxin from the trichothecene family, posing risks to human and animal health.
  • The primary toxic mechanism involves inhibition of protein synthesis through ribosome interaction, but full understanding remains limited.
  • This knowledge gap delays effective risk management strategies for trichothecene exposure.

Purpose of the Study:

  • To investigate the structure-activity relationship (SAR) of trichothecenes and their interaction with the ribosome using in silico methods.
  • To identify specific trichothecene derivatives that may contribute to the overall ribotoxic load.
  • To support hazard identification in the risk assessment process for foodborne mycotoxins.

Main Methods:

  • Employed a molecular modeling approach to study the structural basis of trichothecene-ribosome interactions.
  • Utilized a structure-activity relationship (SAR) perspective to analyze binding and inhibition.
  • Tested a set of 16 modified trichothecene compounds, including novel forms, against a ribosome inhibition model.

Main Results:

  • Regiospecific glycosylation at position 3 of the sesquiterpenoid scaffold (e.g., T-2 toxin-3-glucuronide, DON-3-glucuronide) was found to impair ribosome interaction.
  • Other tested trichothecene derivatives, including neosolaniol, nivalenol, and HT-2 toxin, demonstrated potential ribosome inhibition.
  • Several compounds, previously untested for ribosome binding, were identified as potentially toxic.

Conclusions:

  • The study elucidates how specific structural modifications in trichothecenes affect their ability to inhibit protein synthesis.
  • Certain glycosylated forms may be less toxic due to impaired ribosome binding.
  • Other trichothecene derivatives warrant high-priority inclusion in future risk assessments to characterize their toxicological hazards.

Related Concept Videos

Riboswitches01:56

Riboswitches

Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
9.9K
The Electron Transport Chain01:30

The Electron Transport Chain

The electron transport chain or oxidative phosphorylation is an exothermic process in which free energy released during electron transfer reactions is coupled to ATP synthesis. This process is a significant source of energy in aerobic cells, and therefore inhibitors of the electron transport chain can be detrimental to the cell's metabolic processes.
Inhibitors of the electron transport chain
Rotenone, a widely used pesticide, prevents electron transfer from Fe-S cluster to ubiquinone or Q...
20.8K
Electron Transport Chain: Complex I and II01:46

Electron Transport Chain: Complex I and II

The mitochondrial electron transport chain (ETC) is the main energy generation system in the eukaryotic cells. However, mitochondria also produce cytotoxic reactive oxygen species (ROS) due to the large electron flow during oxidative phosphorylation. While Complex I is one of the primary sources of superoxide radicals, ROS production by Complex II is uncommon and may only be observed in cancer cells with mutated complexes.
ROS generation is regulated and maintained at moderate levels necessary...
19.3K
Transcriptional Regulation: Riboswitches01:23

Transcriptional Regulation: Riboswitches

Riboswitches are RNA elements that regulate gene expression by altering their secondary structures in response to specific effector molecules. These elements, located in the leader regions of certain mRNAs, act as transcriptional regulators by toggling between alternative conformations to control downstream gene expression. Riboswitch-mediated regulation is a precise mechanism for modulating biosynthetic pathways, as exemplified by the riboflavin biosynthesis pathway in Bacillus...
960
Types of RNA01:23

Types of RNA

Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
73.5K
Fungal Phylum Basidiomycota01:26

Fungal Phylum Basidiomycota

Basidiomycota is a diverse phylum of fungi that includes ecologically significant decomposers such as white rot fungi, symbionts like mycorrhizal fungi, plant pathogens such as rusts and smuts, and edible species like Agaricus bisporus (the common button mushroom). These fungi play crucial roles in nutrient cycling, symbiotic relationships, and even human health. Their defining feature is the basidium, a microscopic club-shaped structure responsible for producing basidiospores.Fruiting Bodies...
1.7K