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Halogen bonding stabilizes a cis-azobenzene derivative in the solid state: a crystallographic study.
Marco Saccone1, Antti Siiskonen1, Franisco Fernandez-Palacio2
1Laboratory of Chemistry and Bioengineering, Tampere University of Technology, PO Box 541, FI-33101 Tampere, Finland.
Summary
Fluorinated azobenzene crystals reveal that halogen bonding stabilizes the cis-isomer. This finding aids in designing new photoresponsive materials using halogen bonding.
Area of Science:
- Crystallography
- Materials Science
- Organic Chemistry
Background:
- Azobenzene derivatives are photoresponsive molecules with distinct trans- and cis-isomers.
- The cis-isomer is often metastable, making its crystallization challenging.
- Understanding factors stabilizing the cis-isomer is crucial for developing photoresponsive materials.
Purpose of the Study:
- To synthesize and characterize fluorinated azobenzene isomers.
- To investigate the role of halogen bonding in stabilizing the cis-azobenzene isomer.
- To explore the influence of aliphatic chains on molecular packing and stability.
Main Methods:
- Single-crystal X-ray diffraction for structural characterization.
- Density Functional Theory (DFT) calculations to analyze bonding interactions.
- Synthesis of fluorinated azobenzene derivatives with aliphatic chains.
Main Results:
- Crystals of both trans- and cis-isomers of a fluorinated azobenzene were successfully grown and analyzed.
- Fluorine substitution increased the lifetime of the cis-isomer, enabling its crystallization.
- Halogen bonding (N...I synthon) was identified as a key interaction stabilizing the cis-isomer.
- Aliphatic chains induced phase segregation, stabilizing both isomers' molecular arrangements.
Conclusions:
- Halogen bonding plays a critical role in stabilizing the metastable cis-azobenzene isomer.
- The presence of fluorine atoms and aliphatic chains influences crystal packing and isomer stability.
- This study contributes to understanding non-covalent interactions in azobenzene isomers, informing the design of solid-state photoresponsive materials.