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Updated: Mar 2, 2026

Purification of Ubiquitinated p53 Proteins from Mammalian Cells
Published on: March 21, 2022
Cytoplasmic E3 ubiquitin ligase CUL9 controls cell proliferation, senescence, apoptosis and genome integrity through
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Abstract:
CUL9 is a member of the cullin family of E3 ubiquitin ligases, and it localizes predominantly in the cytoplasm. Deletion of Cul9 in mice results in increased DNA damage, widespread aneuploidy, spontaneous tumor development, accelerated Eμ-Myc-induced lymphomagenesis and susceptibility to carcinogenesis. CUL9 binds to p53 and causes cell apoptosis when ectopically expressed. Whether the function of CUL9 in maintaining genomic integrity and suppressing tumorigenesis is linked to p53 has not been genetically tested. Here we report that deletion of CUL9 in human cells results in attenuated p21 induction and impaired cellular response to DNA damage. We show that disruption of Cul9-p53 binding in mouse embryo fibroblasts (MEFs) by a knock-in mutation in Cul9 (Δp53) increases S-phase cell population, accumulates DNA damage during DNA replication and decreases apoptosis to both endogenous and exogenous DNA-damaging agents. The extent of these alterations in Cul9Δp53 MEFs is indistinguishable to those seen in Cul9-/- MEFs and comparable to those seen in p53-/- MEFs. Deletion of CUL9 in p53 null cells does not lead to further increase of DNA damages. Both Cul9-/- and Cul9Δp53 MEFs proliferate faster and undergo spontaneous immortalization while retaining both Arf and p53. These results demonstrate that the functions of CUL9 in regulating cell proliferation and maintaining genomic integrity are mainly mediated by p53, and that CUL9 is a critical p53 activator.
Insights
Cullin 9 (CUL9) is a critical activator of the tumor suppressor p53. Loss of CUL9 function impairs DNA damage response and promotes genomic instability, primarily through its interaction with p53.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- Cullin 9 (CUL9) is an E3 ubiquitin ligase predominantly found in the cytoplasm.
- CUL9 deletion in mice leads to increased DNA damage, aneuploidy, and tumor development.
- CUL9 interacts with p53, suggesting a potential role in p53-mediated apoptosis.
Purpose of the Study:
- To genetically investigate the link between CUL9's function in genomic integrity and tumor suppression, and its interaction with p53.
- To elucidate the role of CUL9-p53 binding in cellular responses to DNA damage and proliferation.
Main Methods:
- Deletion of CUL9 in human cells to assess DNA damage response.
- Generation of a knock-in mouse embryo fibroblast (MEF) model with disrupted Cul9-p53 binding (Cul9Δp53).
- Comparison of Cul9-/-, Cul9Δp53, and p53-/- MEFs for DNA damage accumulation, cell cycle progression, and apoptosis.
Main Results:
- CUL9 deletion in human cells resulted in reduced p21 induction and impaired DNA damage response.
- Cul9Δp53 MEFs exhibited increased DNA damage during replication, reduced apoptosis, and elevated S-phase populations, similar to Cul9-/- and p53-/- MEFs.
- CUL9 deletion did not further increase DNA damage in p53 null cells, indicating p53-dependence.
- Both Cul9-/- and Cul9Δp53 MEFs showed faster proliferation and spontaneous immortalization.
Conclusions:
- CUL9's role in regulating cell proliferation and maintaining genomic integrity is largely mediated through its interaction with p53.
- CUL9 functions as a critical activator of p53, influencing its tumor-suppressive functions.
- Disruption of CUL9-p53 binding phenocopies the effects of CUL9 or p53 loss on genomic stability and proliferation.
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