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Author Spotlight: Emerging Technologies and Advanced Tools for Decoding Metabolomics Data Analysis
Published on: November 10, 2023
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Exposome-Scale Investigations Guided by Global Metabolomics, Pathway Analysis, and Cognitive Computing.
Benedikt Warth1, Scott Spangler2, Mingliang Fang3
1Department of Food Chemistry and Toxicology, Faculty of Chemistry, University of Vienna , Währingerstraße 38, 1090 Vienna, Austria.
Analytical Chemistry
|September 26, 2017
Summary
Understanding the exposome, or total environmental exposures, is crucial for health. This study presents a new high-throughput technology using mass spectrometry and AI to identify toxicants and their biological effects, advancing environmental health research.
Area of Science:
- Environmental Health
- Metabolomics
- Toxicology
Background:
- Concurrent exposure to diverse xenobiotics and their combined toxic effects are significant in health and disease but remain understudied.
- Investigating the "exposome" (total exposures) and biological impacts is a new environmental health paradigm lacking user-friendly, high-throughput technology.
Purpose of the Study:
- To demonstrate a novel, high-throughput workflow for comprehensive exposome assessment.
- To elucidate the biological effects of environmental toxicants and their combined actions.
- To address methodological challenges in current exposomics research.
Main Methods:
- Utilized mass spectrometry-based global exposure metabolomics.
- Employed tailored database queries and cognitive computing for analysis.
- Expanded the METLIN Exposome database to over 950,000 small molecules.
- Integrated XCMS/METLIN platform with metabolomic pathway analysis and artificial intelligence.
Main Results:
- Successfully identified environmental toxicants, food contaminants, drugs, and their biotransformation products.
- Demonstrated the platform's capability to reveal biological effects through metabolomic pathway analysis.
- Showcased artificial intelligence's role in assessing potential toxicant impacts.
Conclusions:
- The presented workflow offers a user-friendly, high-throughput solution for exposomics research.
- This approach facilitates a deeper understanding of environmental exposures and combined toxic effects on human health.
- Advances the field of environmental health by enabling comprehensive exposure assessment and biological effect elucidation.
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