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Updated: Feb 10, 2026

Conventional BODIPY Conjugates for Live-Cell Super-Resolution Microscopy and Single-Molecule Tracking
Published on: June 8, 2020
Modelling absorption and emission of a meso-aniline-BODIPY based dye with molecular mechanics
Flip de Jong1, Milica Feldt, Jonas Feldt
1Division of Quantum Chemistry and Physical Chemistry, Department of Chemistry, Katholieke Universiteit Leuven, Celestijnenlaan 200F, Leuven 3001, Belgium. jeremy.harvey@kuleuven.be.
Abstract:
Absorption and emission spectra of 8-(4-dimethylaminophenyl)-1,3,5,7-tetramethyl-BODIPY have been calculated using Coupled Cluster (CC) approaches, Time-Dependent Density Functional Theory (TD-DFT) and a QM-informed MM approach. In the case of TD-DFT calculations solvent effects were included using the linear-response (LR), corrected linear response (cLR) and state specific (SS) Polarizable Continuum Model (PCM). We show that range-separated functionals give results in reasonable agreement with coupled cluster methods but both tend to overestimate excitation energies. Furthermore, we show that the SS-PCM approach is unable to provide a quantitative description of solvent effects in these systems, especially for the highly challenging charge-separated charge-transfer state. In contrast, the QM-informed MM approach gives results in good agreement with experiment and we propose a scheme which can be used to directly compare theoretically obtained spectra with experimental ones.
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