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Updated: Feb 9, 2026

Leveraging CyVerse Resources for De Novo Comparative Transcriptomics of Underserved Non-model Organisms
Published on: May 9, 2017
De novo transcriptome assembly associated with fumonisin production by the rice pathogen Fusarium fujikuroi
Keerthi S Guruge1,2,3, Ryuichi Uegaki1
1Pathology and Pathophysiology Research Division, National Institute of Animal Health, National Agriculture and Food Research Organization, Kannondai 3-1-5, Tsukuba 305-0856, Japan.
Abstract:
The present study employed a next-generation sequencing method to assemble a de novo transcriptome database designed to distinguish gene expression changes exhibited by the fumonisin-producing fungus Fusarium fujikuroi when grown under 'fumonisin-producing' compared to 'non-fumonisin-producing' conditions. The raw data of this study have been deposited at DNA Data Bank of Japan (DDBJ) under the accession ID DRA006146.
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