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A Practical Guide to Phylogenetics for Nonexperts
Published on: February 5, 2014
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Evolutionary applications of phylogenetically-informed ecological niche modelling (ENM) to explore cryptic
Mohsen Ahmadi1, Morteza Naderi2, Mohammad Kaboli3
1Department of Natural Resources, Isfahan University of Technology, Isfahan, Iran.
Molecular Phylogenetics and Evolution
|June 16, 2018
Summary
Cryptic diversification in fat dormice (Glis glis) within the Hyrcanian Forests reveals distinct lineages. This suggests ancient forests may harbor multiple hidden refugia for small species.
Area of Science:
- Ecology
- Evolutionary Biology
- Genetics
Background:
- The Hyrcanian Forests, an ancient temperate deciduous forest, is a crucial area for understanding biodiversity.
- Cryptic diversification, the process by which previously unrecognized species evolve, is poorly understood in many forest ecosystems.
- The fat dormouse (Glis glis) serves as a model organism to study diversification patterns in this unique environment.
Purpose of the Study:
- To investigate the phylogenetic status of fat dormouse populations in the Hyrcanian Forests.
- To determine if niche divergence supports cryptic diversification in Glis glis.
- To assess the role of the Hyrcanian Forests as a potential Pleistocene refugium for cryptic species.
Main Methods:
- Mitochondrial Cytochrome b (Cytb) DNA sequencing was employed to reconstruct phylogenetic relationships.
- Phylogenetically informed occurrence data was analyzed using two distinct Ecological Niche Models (ENMs): environmental-space and geographic-space.
- Niche divergence and conservatism were quantified using the ENM frameworks.
Main Results:
- Phylogenetic analysis revealed significant genetic heterogeneity among fat dormouse lineages, including distinct groups within the Hyrcanian Forests.
- The two ENM frameworks confirmed niche divergence between the two identified cryptic lineages.
- Evidence of niche conservatism was observed, supporting the distinct evolutionary trajectories of these lineages.
Conclusions:
- The study confirms the presence of distinct cryptic species of fat dormice within the Hyrcanian Forests.
- The findings suggest that the Hyrcanian Forests, a known Pleistocene refugium, may harbor multiple cryptic refugia for small forest-dwelling species.
- This highlights the importance of ancient forest ecosystems in promoting and preserving hidden biodiversity during past climate oscillations.
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